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. 2015 Sep 30;47:77. doi: 10.1186/s12711-015-0154-0

Table 2.

Number of significant SNPs, FST-indexes and FDR of significant SNPs for three levels of significance

Significance level Number of SNPs FST-index FDR
pgenome wide
 <0.05 17 1.000 <0.001
pnominal
 ≤5 × 10−5 49 0.901 ≤0.015
pnominal
 ≤5 × 10−4 276 0.730 ≤0.034