Skip to main content
. 2015 Jul 21;13:e003. doi: 10.1621/nrs.13003

Table 3. MEMSAT-SVM topology analysis of palmitoyltransferases involved in palmitoylation of ARB, ER1(α) and PRB.

Protein Topology DHHC7
(Q9NXF8)
DHHC21
(Q8IVQ6)
TM Helix Kinks TM Helix Kinks
Sequence 1 - 308 1 - 308
TM-1 41 - 70 (29) 50 - 71 9 - 37 (28) 19 - 35
TM-2 78 - 102 (24) 84 - 92 48 - 67 (19) (pore-lining)
TM-3 173 - 301 (28) 134 - 161 (27) 149 - 163
TM-4 217 - 246 (29) 224 - 232 179 - 203 (24) 185 - 198
Zinc Finger 130 - 180 90 - 140

TM helix length is indicated in parentheses.