Table 6. Low abundance taxa binned at the genera level that are significantly associated with ASD, FGID or ASD*FGID first order interactions.
The FDRs for each low abundance taxa are listed below for the V1V2 and V1V3 datasets, with the threshold of significant <0.1. N.D. is not detected based on filtering criteria. The FDRs are also listed for two genera, Sutterella and Provetella, which have been previously reported to be increased and decreased, respectively, in ASD children compared to unrelated control children [10,11].
| V1V2 | V1V3 | |||||
|---|---|---|---|---|---|---|
| Phylum/Taxa | ASD | FGID | ASD* FGID | ASD | FGID | ASD* FGID |
| Cyanobacteria/Chloroplast | 0.027 | 0.228 | 0.0005 | 0.0702 | 0.280 | 0.0026 |
| Firmicutes/Asteroleplasma | 0.000009 | 0.228 | 0.0006 | 0.742 | 0.591 | 0.644 |
| Proteobacteria/Thalassospira | 0.065 | 0.073 | 0.020 | 0.609 | 0.591 | 0.640 |
| Proteobacteria/Burkholderia | 0.927 | 0 | 0 | 0.861 | 0.871 | 0.939 |
| Proteobacteria/Comamonadaceae | 0.945 | 1 | 0.959 | 0.007 | 0.177 | 0.017 |
| Fusobacteria.Fusobacteriales | 0.92 | 0.826 | 0.797 | 0 | 0 | 0 |
| Bacteroidetes/Prevotellaceae | 0.920 | 0.875 | 0.819 | 0.433 | 0.591 | 0.033 |
| Actinobacteria/Mobiluncus | N.D. | N.D. | N.D. | 0.003 | 0.591 | 0.037 |
| Proteobacteria/Sutterella | 0.928 | 0.905 | 0.824 | 0.999 | 0.999 | 0.999 |
| Bacteroidetes/Prevotella | 0.712 | 0.595 | 0.601 | 0.805 | 0.591 | 0.876 |