Table 4.
Genes shown here were uniquely up- or downregulated in only one of the CcpA mutants in comparison to CcpA-wt; either in LB + 1% glucose (left side) or in LB without glucose (right side).
| LB + 1% glucose | LB without glucose | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CcpA-M17R | CcpA-T62H | CcpA-R304W | CcpA-M17R | CcpA-T62H | CcpA-R304W | |||||||
| 47 | 35 | 91 | 33 | 65 | 151 | |||||||
|
43 Up: |
4 Down: |
8 Up: |
27 Down: |
42 Up: |
49 Down: |
22 Up: |
11 Down: |
9 Up: |
56 Down: |
112 Up: |
39 Down: |
|
| citT | glpD | manA | bdbB | acuA | abrB | fliM | cspB | gltC | acoA | abfA | ydzA | alsS |
| ctc | pyrE | manP | csfB | ald | ahpF | glyQ | dacA | hag | bdbA | acsA | yesL | cgeA |
| cydA | yckB | manR | dppC | amyE | aroE | hemC | feuA | ilvH | bdbB | amyE | yesM | cotV |
| cydB | yqjE | pyrC | fhuD | ansB | cspB | icd | flgE | purQ | csbA | araB | yesN | coxA |
| cydC | yjdF | gudB | bdbA | cspC | lytB | glpP | ydcS | csbC | araD | yfiD | cwlD | |
| gtaB | yjdG | hbs | bofC | ctsR | mdh | pstC | yhfC | csbD | citM | yfiE | leuB | |
| gutR | ynaF | lrpB | dctP | efp | oppD | yaaN | ykoL | dra | csbX | yfiH | leuS | |
| icd | yydJ | nagP | dhaS | fabF | pdhC | yddT | yomL | etfA | cstA | yfmN | nin | |
| ldh | spo0M | drm | frr | pgi | ydfF | ywnJ | etfB | ctaD | ygaO | opuE | ||
| mcsA | sunA | etfB | ftsH | pgk | ydjM | galT | dctB | yhaS | pta | |||
| mcsB | ugtP | hemC | gltP | pgm | yybN | glpF | dctR | yhaX | sigE | |||
| mrgA | ycnI | katE | leuD | rplE | gntP | fabHB | yhfW | spoIIIAC | ||||
| mrpB | ycnK | kdgK | maeN | rplF | gspA | fbaB | yisK | spoVAA | ||||
| oppA | yeeG | kdgT | mntH | rpsK | kipR | glpT | yjdB | ssb | ||||
| phrK | yezE | mmsA | rplQ | rpsS | melA | hutH | ykuN | ybcD | ||||
| smf | yfhC | narG | rpmB | tpiA | mleA | hxlA | ykzA | ybcH | ||||
| spo0E | yfmQ | nupC | rpmF | yaaD | mleN | iolC | ykzE | ybcM | ||||
| treP | yhdN | punA | rpmGB | ykrS | nagP | iolH | yocF | yckE | ||||
| xpaC | yisQ | qcrA | rpsO | ykrT | ndk | iolI | yocG | ycxC | ||||
| ydaD | yjbD | qoxB | rpsT | ylbQ | nhaX | kbl | yomT | ydfR | ||||
| ydaS | yjeA | recO | smpB | yvfV | nupC | kdgA | yomZ | ydjE | ||||
| ydaT | yjmF | resA | sspE | yvzB | odhA | kdgK | yonE | yesS | ||||
| ydbD | ylqC | resB | yabR | odhB | kdgT | yonH | yezD | |||||
| ydhK | yodC | resC | ybaR | pdp | lacA | yonK | yfhC | |||||
| yebE | yoeB | resD | yccG | rpsC | lcfA | yopY | yhcA | |||||
| yfhD | yozB | resE | yceJ | rsbV | malL | yoqF | yhcB | |||||
| yfkJ | yxkO | rocC | yczH | rsbW | mtlR | yoqS | yhcC | |||||
| yhzC | rplF | ydaH | rsbX | pel | yosB | yhjB | ||||||
| yjcG | sunT | ydgB | sdhA | phrC | yosD | yitJ | ||||||
| ykrS | ydhP | ydgF | sdhB | qcrB | yosJ | yjbD | ||||||
| yoqZ | yfiD | ydhB | sunT | qcrC | ypiF | yjeA | ||||||
| yoxC | yhfD | yebC | treR | rocB | ypzC | yocN | ||||||
| ytiA | yolJ | yfjT | ybyB | rocC | yqaD | yodC | ||||||
| ytzE | yoqX | yhbJ | ydaG | sacB | yqcK | yqaS | ||||||
| yuaF | ypwA | yhcB | ydhM | senS | yqkK | yqbM | ||||||
| yuaI | yraO | yjhB | ydhT | spoIIIAH | yqzG | yurO | ||||||
| yuiD | yrkA | ykoA | yfhD | sspO | yraO | yurP | ||||||
| yvaA | ysiA | ylaG | yflT | tyrZ | yrhP | yutK | ||||||
| ywfC | ytxE | yodJ | yhaP | xepA | ytcP | yvgW | ||||||
| ywmE | yuxI | yqeY | yolJ | xhlB | yteQ | |||||||
| ywzA | ywiE | yqjL | yoxC | xkdH | ytlI | |||||||
| yxiS | ywmA | yrvM | yqhA | xkdK | yugM | |||||||
| yxzF | yuiF | yqhB | xkdN | yugN | ||||||||
| yusG | ysbA | xkdO | yukJ | |||||||||
| yutF | ysbB | xkdT | yulD | |||||||||
| yuzG | ytiA | xkdV | yuxI | |||||||||
| yvsH | ytxJ | xkdW | yvcA | |||||||||
| yvzC | yvdI | xkdX | yvdJ | |||||||||
| ywrK | yvdR | xsa | yveN | |||||||||
| ywiE | xtmB | yvfL | ||||||||||
| ywjB | ycbO | yvfM | ||||||||||
| ywjC | ycbR | ywdC | ||||||||||
| ywqI | ycgB | ywmA | ||||||||||
| yxaI | ycsA | ywsA | ||||||||||
| yxiE | ydhN | yxeI | ||||||||||
| yxnA | ydhS | yxjC | ||||||||||
Up means: these genes are more abundant (i.e., less repressed) in the CcpA-mutant than in CcpA-wt. Down means: these genes are less abundant (i.e., more repressed) in the CcpA-mutant than in CcpA-wt. The numbers refer to Figures 2A,B and represent the number of uniquely up- or down-regulated genes per CcpA-mutant.