Table 2.
Evaluation through capillary gel separation of SSR length polymorphism from ten randomly selected transcripts
| Seq ID | SSR | Start | Stop | SSR length | SSR type | Capillary electrophoresis | PSR | ||
|---|---|---|---|---|---|---|---|---|---|
| Genotype 1 | Genotype 2 | Genotype 1 | Genotype 2 | ||||||
| TR11073 | (GAT)6 | 389 | 406 | 18 | p3 | 222 | 222 + 219 | 6 | 6; 5 |
| TR11727 | (TCA)5 | 1026 | 1040 | 15 | p3 | 182 | 179 | 6 | 5 |
| TR12365 | (GAT)6 | 269 | 286 | 18 | p3 | 243 + 246 | 243 + 246 | 8; 6 | 8; 6 |
| TR19012 | (CAC)7 | 208 | 228 | 21 | p3 | 239 | 233 + 239 | 7 | 7; 5 |
| TR6251 | (CAA)9 | 204 | 230 | 27 | p3 | 294 | 294 + 297 | 9 | 10; 9 |
| TR1824 | (CAT)5 | 90 | 104 | 15 | p3 | 277 | 274 | 6 | 5 |
| TR12469 | (TC)7 | 1300 | 1313 | 14 | p2 | 234 | 232 | 7 | 6 |
| TR7469 | (ATC)7 | 20 | 40 | 21 | p3 | 237 | 237 + 240 | 7 | 7; 8 |
| TR2455 | (TTG)6 | 57 | 74 | 18 | p3 | 239 | 239 + 242 | 6 | 6 |
| TR142 | (TCT)9 | 1874 | 1900 | 27 | p3 | 159 | 156 + 159 | 9 | 9 |
Columns 7 and 8 report amplicon size detected into two genotypes. Columns 9 and 10 list the number of repeated units as identified by PSR