Table 1.
Quantity | Valuea | |
---|---|---|
Holo (298K) | Apo (308K) | |
NOE upper distance limit | 2471 | 2392 |
Intraresidual | 646 | 630 |
Short range | 709 | 646 |
Medium range | 455 | 399 |
Long range | 661 | 717 |
Dihedral angle constraints | 798 | 795 |
Residual target function value (Å2) | 2.04±0.26 | 1.95±0.21 |
Residual NOE violations | ||
Number≥0.1 Å | 22±4 | 16±4 |
Maximum (Å) | 0.14±0.4 | 0.13±0.01 |
Residual dihedral angle violations | ||
Number≥2.5° | 1±1 | 2±1 |
Maximum (°) | 3.0±1.1 | 3.5±1.0 |
RMSD from ideal geometry | ||
Bond lengths (Å) | 0.012 | 0.012 |
Bond angles (°) | 2.2 | 2.2 |
AMBER energies [kcal mol−1] | ||
Total | −5351± 155 | −4737±134 |
van der Waals | −397±27 | −328±17 |
Electrostatic | −6071±174 | −5723±132 |
RMSD to the mean coordinates (Å)b | ||
Backbone (5−150) | 0.66±0.09 | 1.67±0.48 |
Heavy atoms (5−150) | 1.18±0.10 | 2.43±0.64 |
Backbone (5−10,16−37,68−150) | 0.56±0.10 | 0.58±0.09 |
Heavy atoms (5−10,16−37,68−150) | 1.11±0.17 | 1.05±0.14 |
Ramachandran plot statistics (%)c | ||
Most favored regions | 78.8 | 72.6 |
Additional allowed regions | 20.8 | 26.3 |
Generously allowed regions | 0.5 | 1.0 |
Disallowed regions | 0.0 | 0.1 |
Except for the top six entries, which represent the input generated for the final cycle of structure calculation with UNIO-ATNOS/CANDID and CYANA 3.0, average values and standard deviations for the 20 energy-minimized conformers are given.
The numbers in parentheses indicate the residues for which the RMSD was calculated.
As determined by PROCHECK.18