Table 1.
Function annotations of top 10 up-regulated and down-regulated genes in PARE analysis
| Transcript ID | Log2 (Dd/Dc) | Best rice hit name | Best rice hit define |
|---|---|---|---|
| Up-regulated | |||
| Si037737m | 9.53 | Os03g19290.1 | mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| Si026583m | 9.34 | Os11g26570.1 | dehydrin, putative, expressed |
| Si029917m | 9.20 | Os03g20680.1 | late embryogenesis abundant protein 1, putative, expressed |
| Si017178m | 8.96 | Os02g52210.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Si023261m | 8.59 | Os05g46480.1 | late embryogenesis abundant protein, group 3, putative, expressed |
| Si016486m | 8.52 | Os02g15250.1 | late embryogenesis abundant domain-containing protein, putative, expressed |
| Si021866m | 8.11 | Os04g57880.1 | heat shock protein DnaJ, putative, expressed |
| Si039986m | 8.09 | Os10g36180.1 | expressed protein |
| Si011162m | 8.02 | Os01g03320.1 | BBTI2 - Bowman-Birk type bran trypsin inhibitor precursor, expressed |
| Si002813m | 7.83 | Os01g50910.1 | late embryogenesis abundant protein, group 3, putative, expressed |
| Down-regulated | |||
| Si022090m | −6.45 | Os03g43440.1 | CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Si014685m | −5.83 | Os08g06110.2 | MYB family transcription factor, putative, expressed |
| Si022014m | −5.59 | Os05g31730.1 | transporter, monovalent cation:proton antiporter-2 family, putative, expressed |
| Si013398m | −5.46 | Os08g06110.2 | MYB family transcription factor, putative, expressed |
| Si030389m | −5.26 | Os09g11230.1 | Ser/Thr protein phosphatase family protein, putative, expressed |
| Si010832m | −4.75 | Os11g02520.1 | WRKY104, expressed |
| Si003491m | −4.74 | Os01g21250.1 | late embryogenesis abundant protein, putative, expressed |
| Si000941m | −4.42 | Os07g35350.1 | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| Si005093m | −4.22 | ||
| Si014375m | −4.17 | Os08g01140.1 | cytochrome b561, putative, expressed |
“Dc” and “Dd” represent degradation level in control sample (Dc) and drought-treated sample (Dd) revealed by parallel analysis of RNA end tags. Annotations were retrieved from phytozome. Note: Columns are blank if no corresponding data is available