Table 2. Modules of differentially co-expressed genes: permutation and preservation results.
Module | Number of genes | Permutation index | Permutation pBonf | Preservation Zsummary |
---|---|---|---|---|
Blue | 2007 | 40 | 0.024 | 6.06 |
Black | 2837 | 553 | 0.33 | NA |
Brown | 1822 | 103 | 0.062 | NA |
Green | 1598 | 329 | 0.20 | NA |
Turquoise | 3106 | 75 | 0.045 | -0.74 |
Yellow | 1818 | 81 | 0.047 | 11.32 |
pBonf indicates Bonferroni-corrected p-value, NA: not applicable (module not tested for preservation). Modules were randomly color-labeled.