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. 2015 Sep 3;22(5):319–329. doi: 10.1093/dnares/dsv015

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© The Author 2015. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 4. — Tiling Assembly identified over 2.5 times more novel genes than Cufflinks. Novel genes identified by Tiling Assembly and Cufflinks were compared to determine how much they overlapped. (A) When all novel genes were considered, 7,460 genes were exclusively identified by Tiling Assembly, 1,316 by Cufflinks, and 2,669 by both. (B) When only novel genes with high expression levels (≥100 RPKE) were considered, 3,473 genes were exclusively identified by Tiling Assembly, 52 by Cufflinks, and 1,166 by both.