Table 4.
Blood methylation levels in 12 CRC cases positive before and after tumour resection
| Case characteristics | Proportion of methylated BCAT1 and IKZF11 (% of total yield) | |||
|---|---|---|---|---|
| Tumour location | Stage | Before resection | After resection | Δ Days |
| Sigmoid | l | <0.00001 | 0 | 140 |
| Splenic flexure | l | <0.00001 | 0 | 48 |
| Caecum | llA | 1.8 | 0 | 115 |
| Ascending | llA | 0.7 | <0.00001 | 70 |
| Sigmoid | llA | 5.6 | 0 | 162 |
| Sigmoid | llA | 2.6 | 0 | 64 |
| Ascending | llA | 1.7 | 0 | 83 |
| Ascending | llA | 1.4 | 0 | 39 |
| Caecum | lllA | 5.0 | 0 | 58 |
| Rectum | lllA | 0.8 | 0 | 47 |
| Ascending | lllB | 0.9 | 0 | 50 |
| Sigmoid | lllC | 0.6 | 0.6 | 157 |
1The lower limit of the linear range for the qPCR assay was 100pg per reaction. The average DNA amount per reaction was 2 ng, thus methylation levels estimated to be <5% but above zero are extrapolated and most likely inaccurate