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. 2015 Oct 8;6:1103. doi: 10.3389/fmicb.2015.01103

Table 2.

PCR primers used in this study.

Target gene Nucleotide sequence (5′–3′) Annealing temperature (°C) Product size (bp) References
blaTEM F: CATTTCCGTGTCGCCCTTATTC
R: CGTTCATCCATAGTTGCCTGAC
58 800 Luo et al., 2011
blaSHV F: AGCCGCTTGAGCAAATTAAAC
R: ATCCCGCAGATAAATCACCAC
58 713 Luo et al., 2011
blaCTX−M−1 group F: TTAGGAARTGTGCCGCTGYAa
R: CGATATCGTTGGTGGTRCCATa
55 688 Luo et al., 2011
blaCTX−M−2 group F: CGTTAACGGCACGATGAC
R: CGATATCGTTGGTGGTRCCATa
55 404 Luo et al., 2011
blaCTX−M−9 group F: TCAAGCCTGCCGATCTGGT
R: TGATTCTCGCCGCTGAAG
58 561 Luo et al., 2011
blaCTX−M−8∕25 group F: AACRCRCAGACGCTCTACa
R: TCGAGCCGGAASGTGTYATa
55 326 Luo et al., 2011
qnrA F: TCAGCAAGAGGATTTCTCA
R: GGCAGCACTATTACTCCCA
58 627 Robicsek et al., 2005
qnrB F: GATCGTGAAAGCCAGAAAGC
R: ACGATGCCTGGTAGTTGTCC
53 469 Gay et al., 2006
qnrS F: ACGACATTCGTCAACTGCAA
R: TAAATTGGCACCCTGTAGGC
53 417 Gay et al., 2006
qnrC F: GGGTTGTACATTTATTGAATC
R: TCCACTTTACGAGGTTCT
52 447 Wang et al., 2009
qnrD F: CGAGATCAATTTACGGGGAATA
R: AACAAGCTGAAGCGCCTG
52 582 Cavaco et al., 2009
aac(6')-Ib F: TTGCGATGCTCTATGAGTGGCTA
R: CTCGAATGCCTGGCGTGTTT
55 482 Park et al., 2006
qepA F: AACTGCTTGAGCCCGTAGAT
R: GTCTACGCCATGGACCTCAC
55 596 This study
oqxA F: GCGTCTCGGGATACATTGAT
R: GGCGAGGTTTTGATAGTGGA
56 482 This study
oqxB F: CTGGGCTTCTCGCTGAATAC
R: CAGGTACACCGCAAACACTG
55 498 This study
intI1 F: CCTCCCGCACGATGATC
R: TCCACGCATCGTCAGGC
54 280 Dillon et al., 2005
intI2 F: AAATCTTTAACCCGCAAACGC
R: ATGTCTAACAGTCCATTTTTAAATTCTA
54 439 Dillon et al., 2005
intI3 F: AGTGGGTGGCGAATGAGTG
R: TGTTCTTGTATCGGCAGGTG
54 599 Dillon et al., 2005
IntI1 variable region F: TCATGGCTTGTTATGACTGT
R: GTAGGGCTTATTATGCACGC
56 Variable White et al., 2000
a

Y = T or C; R = A or G; S = G or C; D = A or G or T.

F, forward; R, reverse.