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. 2015 Oct 8;10(10):e0139932. doi: 10.1371/journal.pone.0139932

Table 2. Summary of specificities of several characterised GH27 enzymes, and motivation for the mutations of CpArap27.

CpArap27 variant form Equivalent previously characterised enzyme
Enzyme Ara:Gal ratio a Enzyme k cat / K m Ara:Gal ratio a
Wild-type Ara only GsAbp Ara:495 [42] Ara (trace pNP-α-D-Galp, pNP-α-L-Araf)
I56E Ara only SaArap27A Ara:88.1 Gal:0.5 [41] 196:1
I56D 142:1 ScaGal Gal:63.6 [21] Gal only
I56D 142:1 SaArap27A E99D Ara:1.5 Gal:6.7 [41] 1:4.4
I56C 1:2.2 FoAp1 Ara:9.2 Gal: 9.9 [50] 1.1:1
I56C 1:2.2 FoAp2 Ara:8.1 Gal:0.6 [50] 13.6:1
I56A 1:1.4 No examples - -

Kinetic parameters for several GH27 enzymes, with different substrate specificities and different amino acids in a key active site position, are compared. Kinetic parameters for all forms of CpArap27 are given in Table 1. The Ara:Gal ratios were determined by dividing k cat / K m values and normalising the smaller value to 1.

a The Ara:Gal ratio of each enzyme or enzyme variant compares k cat / K m for hydrolysis of pNP-β-l-Arap and pNP-α-d-Galp respectively.