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. Author manuscript; available in PMC: 2016 Nov 1.
Published in final edited form as: Biochim Biophys Acta. 2015 Sep 2;1848(11 0 0):2767–2778. doi: 10.1016/j.bbamem.2015.09.003

Table 3.

Averaged peptide penetration depth based on the AT 60/64 and 30/34 simulation series

Peptide COM from bilayer center ± S.D. (nm) Trp residue COM from bilayer center ± S.D. (nm) Trp residue COM from peptide COM ± S.D. (nm)
60/64 30/34* 60/64 30/34 60/64 30/34
WT 1.84 ± 0.16 1.78 ± 0.12 1.20 ± 0.16 1.14 ± 0.11 −0.64 ± 0.06 −0.64 ± 0.07
K8E 1.88 ± 0.24 1.89 ± 0.20 1.39 ± 0.32 1.44 ± 0.35 −0.49 ± 0.12 −0.44 ± 0.18
K15E 1.70 ± 0.15 1.71 ± 0.11 1.08 ± 0.17 1.08 ± 0.12 −0.63 ± 0.06 −0.64 ± 0.06
K20E 1.62 ± 0.15 1.70 ± 0.12 1.06 ± 0.18 1.19 ± 0.20 −0.56 ± 0.11 −0.51 ± 0.11
K22E 1.69 ± 0.14 1.71 ± 0.11 1.07 ± 0.17 1.10 ± 0.15 −0.62 ± 0.09 −0.51 ± 0.09
K25E 1.90 ± 0.17 1.81 ± 0.10 1.23 ± 0.17 1.14 ± 0.10 −0.67 ± 0.06 −0.67 ± 0.06
K28E 1.84 ± 0.16 1.82 ± 0.21 1.28 ± 0.19 1.27 ± 0.30 −0.56 ± 0.09 −0.55 ± 0.12
*

For the peptide penetration depth based on the 30/34 simulations, S.D. (nm) of the means of the fifteen simulations was as follows; WT, 0.09; K8E, 0.17; K15E, 0.08; K20E, 0.09; K22E, 0.08; K25E, 0.07 and K28E, 0.20. The depths of the mutants based on the latter set were significantly different from that of WT with p<10−7 (t-test) for K25E and with smaller p-values (i.e., greater significances) for the other mutants.