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. 2015 Aug 19;290(41):24793–24805. doi: 10.1074/jbc.M115.670646

TABLE 1.

PCR primers used in this study

F, forward; R, reverse.

Primer ID Sequence Product
A F, 5′-GCTCCCTGGAGGGACTTATC-3′ 2442 bp
R, 5′-GGGAAACACCATTTCACCTG-3′
B F, 5′-GCTTCTGGGAGTCCTTTGTG-3′ 1298 bp
R, 5′-ACCATCCCCATTCCTACTCC-3′
C F, 5′-CCCCTTTTCTCCTCTCAACC-3′ 1537 bp
R, 5′-ATTTTCCCCGTCCAAAGAGT-3′
D F, 5′-GGGGTCAGGGATATTCTGGT-3′ 1565 bp
R, 5′-AATCTATGCTGAGGCCGAGA-3′
E F, 5′-CCTGTCATCAAGGGTAGCAGT-3′ 1694 bp
R, 5′-CACAATGCTCAGCTATTCTTGG-3′
F F, 5′-CAAAGCCCTCTTAGCTTACTGGTT-3′ 1829 bp
R, 5′-CACCAAATATGGTACCCATCAAAG-3′
G F, 5′-CACCAAATATGGTACCCATCAAAGCCTCATAA-3′ 1247 bp
R, 5′-TGTTCAGGAAGGGCCTAATG-3′
H F, 5′-CTGCCCTAGGTTGAGCTTTG-3′ 1556 bp
R, 5′GTGGGACATCAGACCGAGTT-3′
I F, 5′-GCTCATGTCCCTCTCTGCTC-3′ 2461 bp
R, 5′-ACCTCATCTTGGTGCCTCTG-3′
J F, 5′-ACCCCACCTGACCTTTCTCT-3′ 1875 bp
R, 5′-GGGTGTCTTTGGTGTTTGCT-3′
K F, 5′-AAGCAAACCCAGCTTTTTGA-3′ 1749 bp
R, 5′-CCCAACCTGTGGTCAGCTAT-3′
L F, 5′-CCCAGAACTCCATCCTCAAA-3′ 895 bp
R, 5′-CATGTGCAACATGTGACCTTAGGCCTGA-3′
M F, 5′-GTCCTTCTGACCCCAACTACATAC-3′ 957 bp
R, 5′-TATTTCCTTCACTCGTAGTGGACA-3′
N F, 5′-AGAAATAGTAGGTGTTCCAGGATAGTGCTG-3′ 2017 bp
R, 5′-AAGTACCTATAGATGCTCCTCTAGCTTTTG-3′
O F, 5′-ACCTTGCCTTCTCTAGACCAGTTGGCGAGCA-3′ 1266 bp
R, 5′-CACCACCCAGCCTCAGTGAAAGAGTAT-3′
P F, 5′-TCACTCATCCTGTGCCAAATTGAGACAAAG-3′ 1488 bp
R, 5′-CAAACGACCCCAGCAATTAGCCAAACCA-3′
Q F, 5′-GCACTTGAAGGTTGTACACAGGACAGAG-3′ 1490 bp
R, 5′-TTTGCAAAGGATATGGAGAGGCATCCATCACCCCATATA-3′
R F, 5′-CCTCTGTCTGGTGAACTGTGTATT-3′ 1894 bp
R, 5′-AAAATGCAGATTCTGTAGGTCCTC-3′
S F, 5′-TTCATTTCTTGACCTATGGCTGTA-3′ 1890 bp
R, 5′-CCAGGCAGTATTAGAGATCAGACA-3′
Upstream of TTLL10 to miR-200b F, 5′-CAAATTAGGGTTCTTAGGGCTGTA-3′ 4737 bp
R, 5′-CGTCATCATTACCAGGCAGTATTA-3′
TTLL10 exon1 F, 5′-TTAGATGTGGAGCCATCTTGGGCT-3′ 126 bp
R, 5′-TGTATTTCCGGGAATGGCAGGAGT-3′
TTLL10 exon3 F, 5′-ACAGAGATGGAAGTGAGGCAC-3′ 102 bp
R, 5′-GCCCTTGAATGGGACAGACAG-3′
ChIP primers for S2 F, 5′-AGAAAGGCCCAGTACAGATGAGTTAGTAAT-3′ 120 bp
R, 5′-CTGATACATGTTCTAACTTGAACTCTTGTGCT-3′
-25-kb site F, 5′-CCCCTTTTCTCCTCTCAACC-3′ 226 bp
R, 5′-ACCATCCCCATTCCTACTCC-3′
-14-kb site F, 5′-ACCCCACCTGACCTTTCTCT-3′ 141 bp
R, 5′-ACCTCATCTTGGTGCCTCTG-3′
-10-kb site F, 5′-CAACTACATACTTGGACTGTTTTTGAAGCTTAGATCACAGA-3′ 138 bp
R, 5′-CATGTGCAACATGTGACCTTAGGCCTGA-3′
Zeb2 F, 5′-TGCCCAACCATGAGTCCTC-3′ 121 bp
R, 5′-GCTTGCAGAATCTCGCCACT-3′
Pkd1 F, 5′-TCTCGGAGCAGAATCAATGCC-3′ 102 bp
R, 5′-CAGAGTTGAGGGACAGTGAGAT-3′
18S F, 5′-GTAACCCGTTGAACCCCATT-3′ 151 bp
R, 5′-CCATCCAATCGGTAGTAGCG-3′