Table 2.
Species | Number of strains | Sequence type | Clonal complex | gnd allele | galF allele | O-type | K-antigen type | Colanic acid type | Cellulose bcs genes | Enterobacterial common antigen type |
---|---|---|---|---|---|---|---|---|---|---|
C. sakazakii | 5 | 1 | 1 | 1 | 2 | O1 | K1 | CA1 | + | ECA1 |
C. sakazakii | 1 | 14 | 1 | 1 | 2 | O1 | K1 | CA1 | + | ECA1 |
C. sakazakii | 5 | 8 | 8 | 3 | 4 | O1 | K1 | CA1 | + | ECA1 |
C. sakazakii | 1 | 64 | 64 | 37 | 26 | O2 | K1 | CA2 | + | ECA1 |
C. sakazakii | 1 | 12 | 24 | 22 | O3 | K2 | CA1 | + | ECA1 | |
C. sakazakii | 1 | 31 | 31 | 29 | 26 | O2 | K2 | CA2 | + | ECA1 |
C. sakazakii | 2 | 3 | 3 | 20 | 18 | O2 | K2 | CA2 | + | ECA1 |
C. sakazakii | 34 | 4 | 4 | 2 | 3 | O2 | K2 | CA2 | + | ECA1 |
C. sakazakii | 4 | 15 | 4 | 2 | 3 | O2 | K2 | CA2 | + | ECA1 |
C. sakazakii | 1 | 218 | 4 | 2 | 3 | O2 | K2 | CA2 | + | ECA1 |
C. sakazakii | 1 | 4 | 4 | 14 | 13 | O4 | K2 | CA2 | + | ECA1 |
C. sakazakii | 7 | 12 | 14 | 13 | O4 | K2 | CA2 | + | ECA1 | |
C. sakazakii | 2 | 40 | 45 | 14 | 13 | O4 | K2 | CA2 | + | ECA1 |
C. sakazakii | 5 | 13 | 13 | 28 | 25 | O2 | K2 | CA2 | CL- | ECA1 |
C. sakazakii | 1 | 100 | 100 | 13 | 1 | O1 | K2 | CA1 | CL- | ECA1 |
C. sakazakii | 1 | 125 | 100 | 13 | 1 | O1 | K2 | CA1 | CL- | ECA1 |
C. sakazakii | 1 | 148 | 16 | 23 | 21 | O1 | K2 | CA1 | + | ECA1 |
C. sakazakii | 1 | 257 | 21 | 21 | 19 | O1 | K2 | CA1 | + | ECA1 |
C. sakazakii | 1 | 297 | 18 | 17 | O1 | K2 | CA1 | + | ECA1 | |
C. malonaticus | 1 | 307 | 112 | 33 | 6 | O1 | K2 | CA2 | + | ECA2 |
C. malonaticus | 2 | 60 | 27 | 24 | O1 | K2 | CA2 | + | ECA2 | |
C. malonaticus | 4 | 7 | 7 | 4 | 5 | O2 | K1 | CA1 | + | ECA2 |
C. malonaticus | 1 | 84 | 7 | 4 | 5 | O2 | K1 | CA1 | + | ECA2 |
C. malonaticus | 2 | 302 | 36 | 32 | O2 | K1 | CA1 | + | ECA2 | |
C. malonaticus | 1 | 129 | 129 | 26 | 23 | O2 | K1 | CA1 | + | ECA2 |
C. malonaticus | 1 | 11 | 5 | 6 | O3 | K1 | CA2 | + | ECA1 | |
C. malonaticus | 1 | 300 | 300 | 38 | 24 | O3 | K1 | CA2 | + | ECA2 |
C. turicensis | 1 | 19 | 24 | 8 | 9 | O1 | K1 | CA2 | + | ECA2 |
C. turicensis | 1 | 5 | 6 | 7 | O4 | K1 | CA2 | + | ECA2 | |
C. turicensis | 1 | 344 | 34 | 30 | O3 | K1 | CA2 | + | ECA2 | |
C. turicensis | 1 | 72 | 72 | 30 | 27 | O3 | K1 | CA2 | + | ECA2 |
C. turicensis | 1 | 35 | 22 | 20 | O3 | K2 | CA2 | + | ECA2 | |
C. turicensis | 1 | 342 | 31 | 28 | O1 | K2 | CA2 | + | ECA2 | |
C. dublinensis sbsp. dublinensis | 1 | 106 | 12 | 12 | O1b | K1 | CA1 | + | ECA2 | |
C. dublinensis subsp. lactaridi | 1 | 79 | 15 | 14 | O1a | K1 | CA1 | + | ECA2 | |
C. dublinensis sbsp. lausanensis | 2 | 80 | 80 | 11 | 11 | O2 | K1 | CA2 | + | ECA2 |
C. dublinensis | 1 | 36 | 80 | 11 | 11 | O2 | K1 | CA2 | + | ECA2 |
C. dublinensis | 1 | 346 | 25 | 11 | O2 | K1 | CA2 | + | ECA2 | |
C. dublinensis | 1 | 341 | 32 | 29 | O2 | K1 | CA2 | + | ECA2 | |
C. dublinensis | 1 | 301 | 35 | 31 | na | K2 | CA2 | + | ECA2 | |
C. muytjensii | 1 | 347 | 10 | 10 | O3 | K1 | CA1 | + | ECA2 | |
C. muytjensii | 1 | 81 | 81 | 16 | 15 | O2 | K1 | CA2 | + | ECA2 |
C. muytjensii | 1 | 294 | 17 | 16 | O1 | K1 | CA1 | + | ECA3 | |
C. universalis | 1 | 54 | 7 | 8 | O1 | K1 | CA2 | + | ECA2 | |
C. condimenti | 1 | 98 | 9 | 33 | O1 | K1 | CA2 | CL- | ECA2 |