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. 2015 Oct 8;16:91. doi: 10.1186/s12881-015-0236-4

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© Smestad and Maher. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — PQS motif characteristics in genes differentially expressed in BS and WS analyzed via ANOVA. PQS motif characteristics (total sequence length, loop lengths, base fractions, and number of G-stacks) in genes differentially expressed in BS and WS. P-values and ratios for comparison to the genome-wide distribution are calculated using a 200 bp bin selection, repeated at a 50 bp interval, and in reference to corresponding PQS position on antisense (AS) strand or sense (S) strand for all genes. Red = genes up-regulated in BS and WS. Blue = genes down-regulated in BS and WS. Solid line = AS. Dashed line = S