Table 1.
Thirty-one out of 115 resequenced cucumber accessions have the TE-allele of CsaMLO8
| Accession number NCBI SRA | TE-allele reads | WT-allele reads | Putative genotype | PI or CGN number | Name accession | Group |
|---|---|---|---|---|---|---|
| SRR543205 | 9 | 0 | Homozygous | PI 215589 | 13598 | Indian |
| SRR543216 | 17 | 0 | Homozygous | V05A0674 | Bei Jing Xiao Ci | East Asian |
| SRR543221 | 1 | 9 | Heterozygous | V05A1333 | Liao Tong Mi Ci | East Asian |
| SRR543223 | 19 | 0 | Homozygous | V05A0920 | He Cha Huang Gua | East Asian |
| SRR543224 | 19 | 0 | Homozygous | V05A1115 | Qian Qi Li Huang Gua | East Asian |
| SRR543225 | 1 | 7 | Heterozygous | V05A0985 | Ye San Bai | East Asian |
| SRR543226 | 23 | 0 | Homozygous | V05A0428 | Liao Yang Ye San | East Asian |
| SRR543228 | 1 | 0 | Homozygous | - | 228 | East Asian |
| SRR543230 | 18 | 0 | Homozygous | V05A0522 | Huang Gua | East Asian |
| SRR543231 | 5 | 8 | Heterozygous | V05A0552 | Qing Dao Qiu Ye Er San | East Asian |
| SRR543240 | 1 | 13 | Heterozygous | CGN19828 | - | East Asian |
| SRR543242 | 22 | 0 | Homozygous | V05A0034 | Da Ci Huang Gua | East Asian |
| SRR543243 | 12 | 1 | Heterozygous | V05A1427 | Qiu Huang Gua | East Asian |
| SRR543244 | 1 | 7 | Heterozygous | V05A0291 | Leng Lu Huang Gua | East Asian |
| SRR543246 | 1 | 0 | Homozygous | - | Bai Ye San | East Asian |
| SRR543251 | 4 | 0 | Homozygous | - | 2004348 | East Asian |
| SRR543252 | 11 | 0 | Homozygous | CGN20266 | Hok | Eurasian |
| SRR543253 | 6 | 0 | Homozygous | - | 151G | Eurasian |
| SRR543257 | 5 | 0 | Homozygous | CGN20512 | 752 | Eurasian |
| SRR543258 | 9 | 0 | Homozygous | CGN20515 | Gy 3 (S4) | Eurasian |
| SRR543264 | 2 | 0 | Homozygous | - | 65G | Eurasian |
| SRR543265 | 11 | 0 | Homozygous | - | G8 | Eurasian |
| SRR543267 | 14 | 0 | Homozygous | V05A0726 | Jin Yan Er Hao | East Asian |
| SRR543269 | 10 | 3 | Heterozygous | CGN19579 | 1972 B-2 | Eurasian |
| SRR543271 | 15 | 0 | Homozygous | CGN19844 | 2163 | Eurasian |
| SRR543272 | 2 | 5 | Heterozygous | PI 234517/CGN20898 | SC 50 | Eurasian |
| SRR543274 | 11 | 0 | Homozygous | CGN21627 | Spartan Garden MSU-C7-63 | Eurasian |
| SRR543275 | 4 | 0 | Homozygous | - | Marketmore76 | Eurasian |
| SRR543276 | 4 | 0 | Homozygous | - | GY14 | Eurasian |
| SRR543281 | 9 | 3 | Heterozygous | PI 482412 | TGR 580 | Indian |
| SRR543293 | 6 | 8 | Heterozygous | PI 605943 | USM 307 | Indian |
Total reads of 115 recently resequenced cucumber accessions [8] were assayed in silico for the presence of reads indicating the presence of either the allele of CsaMLO8 characterised by the insertion of a TE, or the wild-type allele. The amount of reads indicating presence of either the TE-allele or the WT-allele of CsaMLO8 is given. Database number, accession names and geographic groups of accessions were obtained from [8]