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. Author manuscript; available in PMC: 2015 Oct 13.
Published in final edited form as: Biochem J. 2009 Nov 11;424(2):273–283. doi: 10.1042/BJ20090699

Table 1. Primer sequences used in the RT-PCR.

F, forward; R, reverse.

Primer Sequence
CerS1 (F) 5′-ACGCTACGCTATACATGGACAC-3′
CerS1 (R) 5′-AGGAGGAGACGATGAGGATGAG-3′
CerS2 (F) 5′-CCGATTACCTGCTGGAGTCAG-3′
CerS2 (R) 5′-GGCGAAGACGATGAAGATGTTG-3′
CerS4 (F) 5′-CTTCGTGGCGGTCATCCTG-3′
CerS4 (R) 5′-TGTAACAGCAGCACCAGAGAG-3′
CerS5 (F) 5′-GCCATCGGAGGAATCAGGAC-3′
CerS5 (R) 5′-GCCAGCACTGTCGGATGTC-3′
CerS6 (F) 5′-GGGATCTTAGCCTGGTTCTGG-3′
CerS6 (R) 5′-GCCTCCTCCGTGTTCTTCAG-3′
Alkaline ceramidase 1 (F) 5′-GCCTAGCATCTTCGCCTATCAG-3′
Alkaline ceramidase 1 (R) 5′-GGAAGTTGCTCTCACACCAGTC-3′
Alkaline ceramidase 2 (F) 5′-AGTGTCCTGTCTGCGGTTACG-3′
Alkaline ceramidase 2 (R) 5′-TGTTGTTGATGGCAGGCTTGAC-3′
Acid ceramidase (F) 5′-TCTTCCTTGATGATCGCAGAACGCC-3′
Acid ceramidase (R) 5′-ACGGTCAGCTTGTTGAGGAC-3′
XBP-1 (F) 5′-AGTGAGCTGGAACAGCAAGTGGTA-3′
sXBP-1 (R) 5′-ACATGACTGGGTCCAAGTTGTCCA-3′
uXBP-1 (R) 5′-TGCAGAGGTGCACGTAGTCTGAGT-3′
CHOP (F) 5′-CCTCACTCTCCAGATTCC-3′
CHOP (R) 5′-TGTCACTTTCCTTTCATTC-3′
GAPDH (F) 5′-ACGGACTTCCTCGGTGATAC-3′
GAPDH (R) 5′-CGGTGACTGTAGCCATATTCG-3′