Table 1.
Summary of isolates investigated with details of whole genome sequencing approaches used and results, including sequencing approach, and genome assembly.
| Sequencing statistics | Bacterial isolate sequenced | |||
|---|---|---|---|---|
| Cptb_RLC_001 | Cptb_RLC_002 | Cptb_RLC003 | Cptb_C231 | |
| Sequencing instrument | Ion torrent | MiSeq | MiSeq | MiSeq |
| Number of contig | 42 | 27 | 57 | |
| Total contig length (bp) | 2231996 | 2323242 | 2317599 | |
| Minimum contig length (bp) | 221 | 321 | 287 | |
| Average contig length (bp) | 53142 | 86046 | 40659 | |
| Maximum Contig Length (bp) | 333978 | 385019 | 152746 | |
| N50 (bp) | 205882 | 235822 | 78603 | |
| Reads | 3507459 | |||
| Mean length (bp) | 183 | |||
| Assembly type | Scaffold | De novo | De novo | De novo |
Contig, Continous set of overlapping DNA; bp, base pairs.