TABLE 4.
Replicon | EC50 |
EC90 |
||
---|---|---|---|---|
Mean ± SD (nM) | Fold shiftb | Mean ± SD (nM) | Fold shiftb | |
1a_H77 (WT) | 0.007 ± 0.004 | 0.017 ± 0.009 | ||
1a_M28T | 0.108 ± 0.035 | 15 | 0.378 ± 0.180 | 22 |
1a_M28V | 0.009 ± 0.006 | 1 | 0.016 ± 0.012 | 1 |
1a_M28A | 0.427 ± 0.220 | 61 | 1.527 ± 0.688 | 91 |
1a_Q30Dc | 3.7 ± 1.7 | 925 | 8.6 ± 3.5 | 1,433 |
1a_Q30H | 0.045 ± 0.033 | 6 | 0.108 ± 0.067 | 6 |
1a_Q30R | 0.114 ± 0.087 | 16 | 0.407 ± 0.212 | 24 |
1a_L31V | 0.431 ± 0.130 | 61 | 2.143 ± 0.737 | 127 |
1a_L31M | 0.070 ± 0.031 | 10 | 0.245 ± 0.162 | 15 |
1a_L31F | 0.673 ± 0.384 | 96 | 2.203 ± 1.605 | 131 |
1a_H58D | 0.041 ± 0.017 | 6 | 0.168 ± 0.066 | 10 |
1a_A92P | 0.007 ± 0.003 | 1 | 0.017 ± 0.005 | 1 |
1a_Y93H | 1.543 ± 0.782 | 220 | 5.930 ± 2.900 | 351 |
1a_Y93N | 6.552 ± 1.253 | 929 | 22.50 ± 8.544 | 1,333 |
1a_Y93C | 0.078 ± 0.004 | 11 | 0.208 ± 0.038 | 12 |
1a_Q30D_Y93Nc | 86.4 ± 60.1 | 21,600 | 257.7 ± 105.7 | 42,950 |
1b_con1 (WT) | 0.003 ± 0.002 | 0.006 ± 0.004 | ||
1b_L28M | 0.006 ± 0.003 | 2 | 0.020 ± 0.006 | 3 |
1b_L31M | 0.003 ± 0.001 | 1 | 0.010 ± 0.004 | 2 |
1b_L31F | 0.046 ± 0.015 | 15 | 0.265 ± 0.206 | 44 |
1b_L31V | 0.013 ± 0.008 | 4 | 0.057 ± 0.029 | 10 |
1b_Y93H | 0.050 ± 0.030 | 17 | 0.400 ± 0.200 | 67 |
1b_V121I | 0.0005 ± 0.0004 | 0.2 | 0.0010 ± 0.0007 | 0.2 |
GT3_S52 (WT) | 0.14 ± 0.09 | 0.49 ± 0.19 | ||
3a_A30K | 7.0 ± 1.7 | 50 | 20 ± 6.5 | 41 |
3a_L31F | 20 ± 2 | 143 | 45 ± 8 | 92 |
3a_E92Kd | ||||
3a_Y93H | 68 ± 40 | 485 | 159 ± 56 | 324 |
RAV, resistance-associated variant; WT, wild type; EC50, effective concentration to inhibit growth by 50% compared to WT growth; EC90, effective concentration to inhibit growth by 90% compared to WT growth. The genotype 1a results were generated with a transient replicon system (except where indicated), whereas the genotype 1b and genotype 3a data were generated with a stable replicon system.
Relative to WT referent.
Results were generated with a stable replicon system where genotype 1a_H77 (WT referent) yielded an EC50 of 0.004 nM and an EC90 of 0.006 nM.
The replicon was unable to be generated due to poor fitness.