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. 2015 Oct 14;5:13872. doi: 10.1038/srep13872

Table 4. Network parameters in Hepatitis E, SARS and herpesviruses.

Network Parameters HEVY2H HEVLuMPIS SARS HSV-1 VZV mCMV EBV KSHV
#Proteins 16 9 31 48 57 111 61 50
#Interactions 35 20 65 111 173 406 218 123
#Interactions (w/o self-interactions) 26 15 59 100 160 393 208 115
Average degreea 4.38 4.44 4.19 4.63 6.07 7.32 7.15 4.92
Average degree (w/o self-interactions) 3.25 3.33 3.81 4.17 5.61 7.08 6.82 4.60
Characteristic path lengthb 1.65 1.64 2.43 2.79 2.34 2.84 2.44 2.84
Diameterc 3.00 3.00 5.00 6.00 5.00 7.00 5.00 7.00
Clustering coefficientd 0.71 0.77 0.41 0.25 0.39 0.24 0.40 0.15
Enrichment over ER 2.44 1.39 2.94 2.53 3.65 3.68 3.35 1.45
Enrichment over ES 1.36 NA 0.99 0.79 1.00 1.23 1.14 0.69

aAverage degree: number of interactions per proteins.

bCharacteristic path length average shortest path length.

cDiameter: maximum shortest path length.

dClustering coefficient and enrichment of clustering coefficient compared to the average of 1000 random graphs of the same size (ER) and 1000 random networks with the same degree distribution (ES). For the Hepatitis E LuMPIS network, enrichment over ES could not be calculated due to its small size. Self-interactions were not included for the computation of average clustering coefficients, characteristic path length and network diameter as well as enrichment values.