Skip to main content
. 2015 Oct 10;43(18):8924–8941. doi: 10.1093/nar/gkv892

Table 4. Correlations between experimental (Hsu et al. (2013) (18)) cutting frequencies at target sites containing a single rG·dG, rC·dC, rA·dA and rU·dT mismatch in the PAM-distal region (≥10th protospacer site)a and measures of guide RNA–protospacer stability.

log10(P-value) Correlation coefficient
Hsu et al. (18) estimated cutting frequency versus guide RNA–protospacer binding energyb −0.4400 (0.0786)
Hsu et al. (18) estimated cutting frequency versus position of mismatch −5.8258 0.3990
Hsu et al. (18) estimated cutting frequency versus fractional time guide RNA bound at position ≥the mth protospacer site in a simulated R-loop (KMC)c m = 14 −9.5550 0.5078
m = 15 −7.4854 0.4522
m = 16 −6.9510 0.4333
m = 17 −3.9270 0.3191
m = 18 −0.7639 (0.1159)
m = 19 −0.5546 (0.1058)
m = 20 −0.2346 (−0.0176)

an = 136.

bSee Supplementary Methods and Supplementary Table S1 for details.

cSee text for details. Max(t) = 100.