Table 1.
Organism | Growth conditions | UniProt ID | PDB ID | Cofactor | T opt | Reference |
---|---|---|---|---|---|---|
Bacteriophage | ||||||
Bacteriophage T4 | Mesophile | P00970 | — | ATP | 37°C | [16, 37] |
Crenarchaeota | ||||||
Aeropyrum pernix | Hyperthermophile | Q9YD18 | — | ATP, ADP | 70°C | [38] |
Desulfurolobus ambivalens | Acidophile/thermophile | Q02093 | — | NR | [39] | |
Staphylothermus marinus | Hyperthermophile | A3DP49 | — | ATP, ADP | 75°C | [40] |
Sulfolobus acidocaldarius | Acidophile/thermophile | Q4JAM1 | — | ATP | 85°C | [41] |
Sulfolobus shibatae | Acidophile/thermophile | Q9P9K9 | — | ATP, dATP | 60–80°C | [42] |
Sulfolobus solfataricus | Acidophile/thermophile | Q980T8 | 2HIX, 2HIV | ATP | NR | [28] |
Sulfophobococcus zilligii | Hyperthermophile | D2CJS7 | — | ATP, ADP, GTP | 75°C | [22, 29] |
Euryarchaeota | ||||||
Archaeoglobus fulgidus | Hyperthermophile | O29632 | 3GDE | ATP | NR | [25] |
Ferroplasma acidarmanus | Acidophile | S0AR65 | — | ATP, dATP | 30°C | [43] |
Ferroplasma acidiphilum | Acidophile | Q2PCE4 | — | ATP, NAD+ | 40°C | [41] |
Haloferax volcanii (LigA) | Halophile | D4GYZ4 | — | ATP | NR | [10] |
Haloferax volcanii (LigN) | Halophile | D4GY98 | — | NAD+ | 45°C | [10, 44, 45] |
Methanothermobacter thermautotrophicus | Thermophile | Q50566 | — | ATP, dATP | 60°C | [46] |
Picrophilus torridus | Acidophile | Q6L195 | — | ATP, NAD+ | 65°C | [41] |
Pyrococcus furiosus | Hyperthermophile | P56709 | 2CFM | ATP | 55°C | [26, 27, 47] |
Pyrococcus horikoshii | Hyperthermophile | O59288 | — | ATP | 70–90°C | [23] |
Thermococcus sp. 1519 | Thermophile | C0LJI8 | 3RR5 | ATP | 70°C | [31, 48, 49] |
Thermococcus fumicolans | Hyperthermophile | Q9HH07 | — | ATP, NAD+ | 65°C | [19] |
Thermococcus kodakaraensis | Thermophile | Q9HHC4 | — | ATP, NAD+ | 65°C | [20, 50] |
Thermococcus onnurineus | Hyperthermophile | B6YTR4 | — | ATP, NAD+ | 80°C | [21] |
Thermococcus sibiricus | Hyperthermophile | C6A2U9 | 4EQ5 | ATP | NR | [30] |
Thermoplasma acidophilum | Acidophile | Q9HJ26 | — | ATP, NAD+ | 65°C | [41] |
T opt: temperature optimum for the DNA ligase in vitro; NR: not reported.