Table 3.
List of SNPs significantly associated with seedling resistance to Ug99 (race TTKSK)
| SNP | Chra | Pos (cM) | P value | R2 (%)b |
|---|---|---|---|---|
| IWB2159 | 0 | 0.0 | 3.15E-06 | 4.8 |
| IWB14222 | 3.45E-04 | 2.8 | ||
| IWB36324 | 6.44E-04 | 2.5 | ||
| IWB37066 | 3.62E-06 | 4.8 | ||
| IWB40312 | 1.97E-07 | 6.1 | ||
| IWB49537 | 2.81E-04 | 2.9 | ||
| IWB68926 | 3.96E-05 | 3.7 | ||
| IWA642 | 1D | 67.7 | 1.32E-04 | 3.2 |
| IWB24497 | 3B | 67.5 | 8.43E-06 | 4.4 |
| IWB30621 | 1.97E-07 | 6.1 | ||
| IWB42046 | 8.27E-08 | 6.5 | ||
| IWB4823 | 8.43E-06 | 4.4 | ||
| IWB56471 | 1.97E-07 | 6.1 | ||
| IWB61425 | 8.43E-06 | 4.4 | ||
| IWB59929 | 74.4 | 3.91E-05 | 3.7 | |
| IWB9451 | 76.9 | 3.36E-04 | 2.8 | |
| IWA5363 | 4A | 40.3 | 7.90E-04 | 2.4 |
| IWA3394 | 5B | 132.3 | 2.29E-05 | 3.9 |
| IWB7593 | 6.14E-04 | 2.5 | ||
| IWB822 | 134.1 | 5.30E-04 | 2.6 | |
| IWB46318 | 215.7 | 1.56E-05 | 4.1 | |
| IWA2099 | 216.7 | 9.72E-05 | 3.3 | |
| IWA2100 | 1.13E-04 | 3.3 |
aChr ‘0’ indicates unmapped SNPs that were significant in the analysis
bR2Indicates the percent of phenotypic variation explained by the significant locus