Table 1.
Lib | Raw reads (M) | Raw bases (Gb) | Clean reads (M) | Clean bases (Gb) | GC rate (%) | Q20 rate (%) |
---|---|---|---|---|---|---|
1 | 2251.27 | 225.13 | 2173.69 | 217.37 | 42.25 | 97.54 |
2 | 2612.37 | 261.24 | 2322.90 | 232.29 | 40.56 | 97.15 |
3 | 2622.27 | 262.23 | 2497.09 | 249.71 | 40.49 | 96.44 |
4 | 2456.33 | 245.63 | 1931.97 | 193.20 | 40.71 | 95.93 |
5 | 2765.69 | 276.57 | 2658.79 | 265.88 | 41.37 | 96.35 |
6 | 2750.33 | 275.03 | 2658.93 | 265.89 | 40.48 | 96.46 |
7 | 2410.54 | 241.05 | 2334.68 | 233.47 | 40.59 | 97.20 |
8 | 2867.82 | 286.78 | 2757.00 | 275.70 | 41.18 | 96.53 |
9 | 2912.57 | 291.26 | 2802.38 | 280.24 | 40.86 | 95.85 |
10 | 2761.11 | 276.11 | 2673.15 | 267.31 | 40.96 | 96.93 |
Total | 26,410.31 | 2641.03 | 24,810.56 | 2481.06 | 40.95 | 96.64 |
Basic statistical information about the RAD sequencing is presented, which contain the raw reads, raw bases, clean reads and clean base after filtered, GC rate mean value and Q20 mean value