Table 1.
Genome Features of Selected Spiroplasma Strains
Genome | Chromosomal Contigs | Combined Size (bp) | G+C Content (%) | Coding Density (%) | Protein-Coding Genes | Length Distribution (Q1/Q2/Q3) (amino acids) | Plectroviral Genes | Annotated Pseudogenes | rRNA Operon | tRNA Genes | Plasmids |
---|---|---|---|---|---|---|---|---|---|---|---|
Spiroplasma citri GII3-3X | AM285301–AM285339 | 1,525,756 | 25.9 | 80.2 | 1,222 | 83/149/286 | 375 | 0 | 1 | 32 | 7 |
Spiroplasma melliferum IPMB4A | AMGI01000001–AMGI01000024 | 1,098,846 | 27.5 | 85.1 | 932 | 176/280/440 | 11 | 12 | 1 | 32 | 0 |
Spiroplasma melliferum KC3 | AGBZ02000001–AGBZ02000004 | 1,260,174 | 27.0 | 84.4 | 1,197 | 141/248/403 | 6 | 28 | 1 | 31 | 2 |
Spiroplasma poulsonii MSRO | JTLV01000001–JTLV01000010 | 1,757,846 | 26.5 | 76.6 | 2,129 | 83/150/278 | 94 | 82 | 1 | 31 | 2 |
Spiroplasma chrysopicola DF-1 | CP005077 | 1,123,322 | 28.8 | 89.0 | 1,009 | 171/278/425 | 0 | 6 | 1 | 33 | 0 |
Spiroplasma syrphidicola EA-1 | CP005078 | 1,107,344 | 29.2 | 90.4 | 1,006 | 176/279/425 | 0 | 3 | 1 | 32 | 0 |
Spiroplasma atrichopogonis GNAT3597 | CP011855 | 1,160,484 | 29.3 | 71.5 | 996 | 108/214/362 | 0 | 158 | 1 | 33 | 0 |
Spiroplasma eriocheiris TDA-040725-5 | CP011856 | 1,365,714 | 29.8 | 86.0 | 1,180 | 168/278/423 | 0 | 30 | 1 | 32 | 0 |