. 2015 Sep 10;7(9):2747–2761. doi: 10.1093/gbe/evv178

Table 1.

Summary of the S. pneumoniae Strain Material Examined

	Number
Genomes in databases^a	304
Strains analyzed^b	241
Serogroups^c	21
STs	115^d
PMEN clones	28 (169)^e
lytA_Spn/LytA_Spn alleles	30/13^f
plyA_Spn/PlyA_Spn alleles	35/10
lytA_Spn–plyA_Spn combinations	65

^aLast date accessed, October 25, 2014.

^bOf the 304 pneumococcal genomes available in databases, those analyzed were the ones in which both the plREPs that flank lytA and plyA were located in the same contig.

^cThe nonencapsulated R6 strain is not taken into account here.

^dNot including nine strains showing seven new and two unknown STs.

^eThe total number of strains belonging to PMEN clones, including SLVs and DLVs, are shown in parentheses.

^fThe lytA_30-_Spn allele was not translated into its protein since it may contain a sequencing error.