Table 1. 50 ABC transporters identified in the marine medaka O. melastigma genome.
| Gene | Size (AA) | Topology | Accession No. | Matched gene | Matched species | E-value |
|---|---|---|---|---|---|---|
| abca1-1 | 2295 | TM-NBD-TM-ABC | KP725006 | abca1 (XP_004086583) | Oryzias latipes | 0.0 |
| abca1-2 | 2271 | TM-NBD-TM-ABC | KP725007 | abca1 (XP_004066316) | Oryzias latipes | 0.0 |
| abca1-like | 2073 | TM-NBD-TM-ABC | KP725008 | abca1 (XP_004554555) | Maylandia zebra | 0.0 |
| abca2 | 2514 | TM-NBD-TM-ABC | KP725010 | abca2 (XP_005447927) | Oreochromis niloticus | 0.0 |
| abca3 | 1707 | TM-NBD-TM-ABC | KP725009 | abca3 (XP_004071707) | Oryzias latipes | 0.0 |
| abca4-1 | 2275 | TM-NBD-TM-ABC | KP725013 | abca4 (XP_004080989) | Oryzias latipes | 0.0 |
| abca4-2 | 2312 | TM-NBD-TM-ABC | KP725014 | abca4 (XP_005476689) | Oreochromis niloticus | 0.0 |
| abca5 | 1687 | TM-NBD-TM-ABC | KP725005 | abca5 (XP_004080721) | Oryzias latipes | 0.0 |
| abca7 | 2353 | TM-NBD-TM-ABC | KP725011 | abca1 (XP_004068024) | Oryzias latipes | 0.0 |
| abca12 | 4758 | TM-NBD-TM-ABC | KP725012 | abca12 (XP_003445395) | Oreochromis niloticus | 0.0 |
| abcb2 | 732 | TM-NBD | KP725027 | abcb2 (XP_004078551) | Oryzias latipes | 0.0 |
| abcb3 | 713 | TM-NBD | KP725050 | abcb3 (XP_004080734) | Oryzias latipes | 0.0 |
| abcb4 | 1290 | TM-NBD-TM-ABC | KP725016 | abcb1 (ADQ20481) | Poeciliopsis lucida | 0.0 |
| abcb6 | 850 | TM-NBD | KP725020 | abcb6 (XP_004066768) | Oryzias latipes | 0.0 |
| abcb7 | 746 | TM-NBD | KP725018 | abcb7 (XP_004073395) | Oryzias latipes | 0.0 |
| abcb8 | 716 | TM-NBD | KP725026 | abcb8 (XP_004079446) | Oryzias latipes | 0.0 |
| abcb9 | 806 | TM-NBD | KP725040 | abcb9 (XP_005806663) | Xiphophorus maculatus | 0.0 |
| abcb10 | 701 | TM-NBD | KP725031 | abcb10 (XP_004067419) | Oryzias latipes | 0.0 |
| abcb11a | 1364 | TM-NBD-TM-ABC | KP725033 | abcb11 (XP_004066603) | Oryzias latipes | 0.0 |
| abcb11b | 1306 | TM-NBD-TM-ABC | KP725019 | abcb11 (XP_004081955) | Oryzias latipes | 0.0 |
| abcc1 | 1511 | TM-NBD-TM-ABC | KP725025 | abcc1 (XP_004573179) | Maylandia zebra | 0.0 |
| abcc2 | 1567 | TM-NBD-TM-ABC | KP725035 | abcc2 (XP_004077201) | Oryzias latipes | 0.0 |
| abcc3 | 1543 | TM-NBD-TM-ABC | KP725036 | abcc3 (XP_004086831) | Oryzias latipes | 0.0 |
| abcc4-1 | 1324 | TM-NBD-TM-ABC | KP725032 | abcc4 (XP_005744288) | Pundamilia nyererei | 0.0 |
| abcc4-2 | 1329 | TM-NBD-TM-ABC | KP725029 | abcc4 (XP_005945197) | Haplochromis burtoni | 0.0 |
| abcc5a | 1383 | TM-NBD-TM-ABC | KP725030 | abcc5 (XP_005751691) | Pundamilia nyererei | 0.0 |
| abcc5b | 1384 | TM-NBD-TM-ABC | KP725039 | abcc5 (XP_004073112) | Oryzias latipes | 0.0 |
| abcc6 | 1510 | TM-NBD-TM-ABC | KP725034 | abcc6 (XP_004066300) | Oryzias latipes | 0.0 |
| abcc7 | 1502 | TM-NBD-TM-ABC | KP725028 | abcc7 (AFV39711) | Oryzias dancena | 0.0 |
| abcc8 | 1587 | TM-NBD-TM-ABC | KP725041 | abcc8 (XP_005803356) | Xiphophorus maculatus | 0.0 |
| abcc9 | 1568 | TM-NBD-TM-ABC | KP725042 | abcc9 (XP_004083272) | Oryzias latipes | 0.0 |
| abcc10 | 1535 | TM-NBD-TM-ABC | KP725043 | abcc7 (XP_004065626) | Oryzias latipes | 0.0 |
| abcc12 | 1368 | TM-NBD-TM-ABC | KP725038 | abcc9 (XP_004067574) | Oryzias latipes | 0.0 |
| abcd1 | 772 | TM-NBD | KP725046 | abcd1 (XP_004086440) | Oryzias latipes | 0.0 |
| abcd2 | 734 | TM-NBD | KP725048 | abcd2 (XP_004082884) | Oryzias latipes | 0.0 |
| abcd3 | 657 | TM-NBD | KP725044 | abcd3 (XP_004080884) | Oryzias latipes | 0.0 |
| abcd4 | 616 | TM-NBD | KP725045 | abcd4 (XP_004083921) | Oryzias latipes | 0.0 |
| abce1 | 599 | NBD-NBD | KP725037 | abce1 (XP_004079653) | Oryzias latipes | 0.0 |
| abcf1 | 819 | NBD-NBD | KP725049 | abcf1 (XP_004074386) | Oryzias latipes | 0.0 |
| abcf2 | 611 | NBD-NBD | KP725051 | abcf2 (XP_004081198) | Oryzias latipes | 0.0 |
| abcf3 | 711 | NBD-NBD | KP725047 | abcf3 (XP_003457877) | Oreochromis niloticus | 0.0 |
| abcg1 | 670 | NBD-TM | KP725015 | abcg1 (XP_004086643) | Oryzias latipes | 0.0 |
| abcg2-1 | 652 | NBD-TM | KP725017 | abcg2 (XP_004079651) | Oryzias latipes | 0.0 |
| abcg2-2 | 664 | NBD-TM | KP725054 | abcg2 (XP_006787117) | Neolamprologus brichardi | 0.0 |
| abcg2-like | 616 | NBD-TM | KP725024 | abcg2 (XP_004066087) | Oryzias latipes | 0.0 |
| abcg4-1 | 648 | NBD-TM | KP725023 | abcg4 (XP_004076001) | Oryzias latipes | 0.0 |
| abcg4-2 | 642 | NBD-TM | KP725022 | abcg4 (XP_004076385) | Oryzias latipes | 0.0 |
| abcg5 | 638 | NBD-TM | KP725021 | abcg5 (XP_004077344) | Oryzias latipes | 0.0 |
| abcg8 | 666 | NBD-TM | KP725052 | abcg8 (XP_003438483) | Oreochromis niloticus | 0.0 |
| abch | 700 | NBD-TM | KP725053 | abcg23-like (XP_011482890) | Oryzias latipes | 0.0 |