Table 2. Base composition of mitochondrial whole genome, protein-coding genes, rRNA genes and control region.
Region | A% | C% | G% | T% | A + T% | G + C% | AT skew | GC skew |
---|---|---|---|---|---|---|---|---|
Whole genome | 39.0 | 17.5 | 10.3 | 33.2 | 72.3 | 27.7 | 0.080 | −0.259 |
nad2 | 33.3 | 19.5 | 9.1 | 38.1 | 71.5 | 28.5 | −0.067 | −0.364 |
cox1 | 29.9 | 20.5 | 16.1 | 33.4 | 63.3 | 36.7 | −0.055 | −0.120 |
cox2 | 33.5 | 19.4 | 13.6 | 33.5 | 67.0 | 33.0 | 0 | −0.176 |
atp8 | 35.2 | 20.4 | 9.2 | 35.2 | 70.4 | 29.6 | 0 | −0.378 |
atp6 | 30.5 | 20.1 | 11.8 | 37.6 | 68.1 | 31.9 | −0.104 | −0.259 |
cox3 | 29.9 | 20.6 | 15.0 | 34.5 | 64.4 | 35.6 | −0.071 | −0.157 |
nad3 | 32.4 | 19.0 | 9.7 | 38.9 | 71.3 | 28.7 | −0.091 | −0.324 |
nad5 | 45.3 | 18.7 | 9.2 | 26.8 | 72.2 | 27.8 | 0.257 | −0.341 |
nad4 | 48.5 | 16.7 | 8.5 | 26.3 | 74.8 | 25.2 | 0.297 | −0.325 |
nad4l | 51.2 | 14.8 | 6.4 | 27.6 | 78.8 | 21.2 | 0.299 | −0.396 |
nad6 | 38.1 | 17.7 | 6.1 | 38.1 | 76.2 | 23.8 | 0 | −0.487 |
cob | 31.3 | 21.3 | 13.3 | 34.1 | 65.4 | 34.6 | −0.043 | −0.231 |
nad1 | 48.0 | 18.7 | 9.8 | 23.5 | 71.5 | 28.5 | 0.343 | −0.312 |
rrnS | 43.1 | 14.3 | 6.8 | 35.8 | 78.8 | 21.2 | 0.093 | −0.355 |
rrnL | 40.7 | 16.8 | 9.0 | 33.5 | 74.2 | 25.8 | 0.097 | −0.302 |
Control region | 45.6 | 7.9 | 6.1 | 40.4 | 86.0 | 14.0 | 0.060 | −0.129 |