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. 2015 Oct 15;16:331. doi: 10.1186/s12859-015-0766-y

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© Ma et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — The breakpoint alignment of the missed CNV call. The shown region in the main window is base pairs 116025000-121875000 on chromosome 4. The two vertical lines (red on the left, and green on the right) in the main window delimit the boundary of the segment of copy number loss (Chr4: 117112372-120460622) missed by CONSERTING as described in Fig. 2, with the breakpoint alignments displayed in the two separate pop-up windows