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. 2015 Oct 15;16:793. doi: 10.1186/s12864-015-2024-0

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© Fan et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — zma-miR166n-5p target sites in lincRNAs in maize. a The predicted alignment between zma-miR166n-5p and its target in lincRNA. b Sequence alignments of lincRNA targets and the surrounding regions for zma-miR166n-5p in maize and 3 other species. The target sites pairing with zma-miR166n-5p are underlined with black boxes. The conservation status of the sequences was analyzed and presented using Weblogo. The logo consists of stacks of symbols, with one stack for each position in the sequence. The overall height of the stack indicates the sequence conservation at that position, while the height of symbols within the stacks indicates the relative frequency of nucleic acids at that position (bdi: B. distachyon; pvi: P. virgatum; sit: S. italica)