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. 2015 Oct 16;10(10):e0140916. doi: 10.1371/journal.pone.0140916

Fig 3. Phylogenetic tree of 98 representatives of Polyomaviridae family obtained using ML methods for concatenated LTag, STag, VP1 and VP2 protein sequence alignment.

Fig 3

The tree is rooted at the most distant PyVs, namely fish polyomaviruses. Numbers at the nodes indicate statistical support (bootstrap values) for branch placements. Red triangles mark taxons with least confidence in their placement, as determined using RogueNaRok. The five lineages: Orthopolyomavirus I, Orthopolyomavirus II, Avipolyomavirus, Malawipolyomavirus and Wukipolyomavirus are highlighted in different colors. Rodent polyomaviruses Murine PyV (MPyV), Hamster PyV (HaPyV), Murine pneumotropic virus (MPtV) and Mastomys PyV (MasPyV) are labeled in green. The novel viruses BVPyV and CVPyV are labeled in blue.