Table 1. Primer sets used for RT-qPCR analysis for screening C. nicotianae hypothetical protein genes for induction under cercosporin toxicity conditions.
Gene | Forward Primer | Reverse Primer | Efficiency 1 |
---|---|---|---|
11sf | AGTGGCTAATCTGCTCTGG | CACTGCTATTCCTGTTGG | 100.08 |
15cF | ACATGCCGCACTCTGTTCATTTGG | GAAGCCCACAACCTGCAACCATTT | 104.48 |
1cF | CCGTTCCTGCAGAGCTCAAG | GCCATTGACCATGTTGAGCATGTC | 109.33 |
200sF | TGCTGATCCGCTAAATGCTAAAAC | GCCGATGGACAAGGGTATAAGATC | 100.21 |
207sF | ATGCTCGATCCTCCGAACCA | CGGCAGCTTTGAGCGTCTTT | 101.78 |
214sR3 | ATCAGAAGAGACAGCATAAAGC | AAGTGGTGGCTCAGCGTGG | 89.57 |
24cF | TGCTTTCACCTTCAAGTTCGAC | TGCCCTTGCCAAAGCTAGG | 106.51 |
40cR | TTGGTCCATCCCTGATCCTGTTGT | TCAGACTCAGCGAGCGAAGGATTT | 99.25 |
55cR | GGAGACAGCCAAGCAAGAAGTC | GGGAAGAAGGCGATTGAGGA | 100.16 |
56cR | ATCGTTCAAGACCGAGAGGCTCAA | ATGCCGAGAGATCAATGTCCCGAT | 105.38 |
71cR | TCAAGCCACCCTACAATGCCTCAA | TTATTTGGTCGGTGCCTTGGACGA | 100.09 |
77sR3 | TGAGTGGTCGCTTGATTCG | ATCTGGACCCGAAATCGTGC | 97.62 |
84sF | AGTGGGAGTGGGAGTCTTGG | AACACTGGAGAACGAATCAACG | 91.29 |
Actin | TGACGATGCGCCACGAGCTGT | TTGATTGGAGCCTCGGTGAGC | 101.20 |
1 Calculated efficiencies for primers for RT-qPCR analysis