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. 2015 Oct 16;10(10):e0140795. doi: 10.1371/journal.pone.0140795

Table 1. Up-regulated PRA–target genes in the presence of P4.

Class Gene Name FC FI Function
A+&AB+ DUSP6 Dual specificity phosphatase 6 2 1.5 Transcriptional target of P53 Interaction with PRB: proliferative transcriptional programs
A+&AB+ BCL 2 -L 1 Bcl-2-like protein 1 1.5 1.2 Overexpression of Bcl-xL: loss of apoptosis
A+&AB+ TNFRSF11A Receptor Activator of Nuclear Factor κ B (RANK) 1.9 1.6 Mammary cell proliferation, migration, cell invasion.
A+&AB+ WNT5A Wingless-type MMTV integration site family, member 5A 1.8 1.3 Tumor suppressor gene Proliferation, differentiation, migration, adhesion, polarity
A+&AB+ LGR4 Leucine-rich repeat-containing G-protein coupled receptor 4 (GPR48) 1.8 1.6 Promoting cancer cell proliferation (Wnt signaling), Invasiveness and metastasis
A+&AB+ FOSB FBJ murine osteosarcoma viral oncogene homolog B 1.8 1.5 Reduced FosB expression: dedifferentiation (breast tumorigenesis)
A+&AB+ TFPI2 Tissue factor pathway inhibitor 2 2.2 2.6 Low expression: breast cancer progression and poor outcome
A+&B+ & AB+ DUSP1 Dual specificity phosphatase 1 1.6 1.6 Cell cycle, dephosphorylation of MAP kinase. Antiproliferative actions of PR

MDA-iPRAB cells were cultured during 24 h in steroid-free medium containing RSL1 (0.5 μM) and/or Dox (2 μM) to induce expression of PRA and/or PRB. Cells were treated by vehicle or P4 (1 nM) for 6 hours and a genome wide transcriptomic studies was performed as described in [6]. A total of 999 genes were affected by PR expression. These genes were separated into three groups: A and B and AB (co-expressed at similar levels relative to physiological conditions) regrouping genes that are regulated by either by PRA, PRB or PRAB. Tables above represent class A+ genes regulated by PRA in the presence of the ligand; Class A+&AB+, genes responsive to liganded PRA and their expression may or may not be influenced by PRB co-expression; Class A±&AB± genes responsive to both liganded and unliganded PRA, and their expression may be influenced by PRB co-expression; Class A+&B+& AB+, genes that are commonly regulated by liganded PRA, PRB and PRAB. FC calculated either by microarray studies or by RT-qPCR analysis and their function in the cancer. FC: Transcriptional Fold Change calculated by microarray studies (FC*) and by RT-qPCR (FI, Fold Induction).