Table 2.
The Pearson correlation coefficients of estimated expression with qRT-PCR measurements using MAQC dataset
| Dataset | Cufflinks | RSEM | MMSEQ | NLDMseq |
|---|---|---|---|---|
| SRA010153 (HBR) | 0.8033 | 0.8117 | 0.8000 | 0.8442 |
| SRA010153 (UHR) | 0.8238 | 0.8265 | 0.8356 | 0.8585 |
| SRA012427 (UHR) | 0.8107 | 0.8345 | 0.8430 | 0.8481 |
Samples HBR and UHR in SRA010153 data and sample UHR in SRA012427 data are used