Table 1.
Features of the in silico genome-scale metabolic model of S. limacinum, M. alpina and Y. lipolytica
| Features | iCY1170_DHA | iCY1106 | iYL619_PCP |
|---|---|---|---|
| Genome feature | |||
| Genome size (Mb) | 60.93 | 38.38 | 20.50 |
| Open reading frames (ORFs) | 14,859 | 11,631 | 6453 |
| In silico metabolic model | |||
| Reactions included in the model | 1769 | 1854 | 1142 |
| Biochemical reactions | 1386 | 1391 | 781 |
| Transport reactions | 195 | 247 | 236 |
| Exchange reactions | 188 | 216 | 125 |
| Metabolites | 1659 | 1732 | 843 |
| ORFs assigned in metabolic model | 1170 | 1106 | 619 |
| ORF coveragea (%) | 7.9 | 9.5 | 9.6 |
aThe number of ORFs in the iCY1170_DHA model divided by the total number of ORFs in the genome