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. 2015 Oct 4;2015:292683. doi: 10.1155/2015/292683

Table 2.

Comparison of most relevant QSAR studies on BBB permeability.

Descriptors N train N test Methods r train 2 Predictive accuracy on test set Reference
Δlop P, log⁡P,and log⁡P cyc 20 Linear Regression 0.69 Young et al. [77]
Excess molar refraction, dipolarity/polarisability, H-bond acidity, and basicity
Solute McGowan volume
148 30 LFER 0.75 r test 2 = 0.73 Platts et al. [66]
ΔG W° 55 Linear Regression 0.82 Lombardo et al. [78]
PSA, the octanol/water partition coefficient, and the conformational flexibility 56 7 MLR 0.85 r test 2 = 0.80 Iyer et al. [79]
CODESSA/DRAGON (482) 200 110 PLS
SVM
0.83
0.97
r test 2 = 0.81 
r test 2 = 0.96
Golmohammadi et al. [62]
Molecular (CODESSA-PRO) descriptors (5) 113 19 MLR 0.78 r test 2 = 0.77 Katritzky et al. [15]
Molecular fragment (ISIDA) descriptors 112 19 MLR 0.90 r test 2 = 0.83 Katritzky et al. [15]
PSA, log⁡P, the number of H-bond acceptors, E-state, and VSA 144 10 Combinatorial QSAR (KNN
SVM)
0.91 r test 2 = 0.8 Zhang et al. [17]
Abraham solute descriptors and indicators 328 LFER 0.75 Abraham et al. [51]
Abraham solute descriptors and indicators 164 164 LFER 0.71 s = 0.25, MAE = 0.20 Abraham et al. [51]
CODESSA/Marvin/indicator (6) 260 63 GA based SVM 0.83 r test 2 = 0.84, RMSE = 0.23 This research, GA/SVM, final model
C = 13.3573, γ = 0.715761, ε = 0.151289
CODESSA/Marvin/indicator (236) 260 63 GA based SVM 0.97 r test 2 = 0.55, RMSE = 0.31 This research, Grid/SVM
C = 8.0, γ = 0.015625, ε = 0.0625
CODESSA/Marvin/indicator (6) 260 63 GA based SVM 0.86 r test 2 = 0.58, RMSE = 0.29 This research, Grid/SVM
C = 8.0, γ = 1.0, ε = 0.125