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. 2015 Oct 4;2015:292683. doi: 10.1155/2015/292683

Table 4.

The most frequently used features for all 6-feature modelsa.

Number Feature name Occurrence
(50 models)
Meaning
11 AbsCarboxy 36 Indicator for carboxylic acid

268 ESP-FHASA_Fractional_HASA_(HASA/TMSA)_Quantum-Chemical_PC 14 H-acceptor surface area/total molecular surface area#

101 Topographic_electronic_index_(all_bonds)_Zefirov's_PC 12 Topological electronic index for all bonded pairs of atomsb‡

8 M_PSA_7.4 11 PSA at pH 7.4

267 ESP-HASA_H-acceptors_surface_area_Quantum-Chemical_PC 10 H-acceptor surface area#

5 delta_log⁡D 9 log⁡D (pH 6.5) − log⁡D (pH 7.4)d,e∧

7 M_PSA_7.0 9 PSA at pH 7.0§

138 HA_dependent_HDCA-2_[Zefirov's_PC] 9 H-donors charged surface area#

6 M_PSA_6.5 8 PSA at pH 6.5§

1 M_log⁡P 7 log⁡P

aRows with the same symbol could be categorized into the same group.

bTopological electronic index is a feature to characterize the distribution of molecular charge: T = ∑(i<j) NB(|q iq j|/r 2 ij), where q i is net charge on ith atom and r ij is the distance between two bonded atoms.

c7.4 is the pH in blood.

d6.5 is the pH in intestine.

e D is the ratio of the sum of the concentrations of all species of a compound in octanol to the sum of the concentrations of all species of the compound in water. For neutral compounds, log⁡D is equal to log⁡P.