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. 2015 Sep 28;112(41):E5628–E5637. doi: 10.1073/pnas.1515966112

Table S1.

List of shRNAs used for screening E3 ligase function

Target genes shRNA sequences Sequence ID
TRAF6 CCGGCCCAGGCTGTTCATAATGTTACTCGAGTAACATTATGAACAGCCTGGGTTTTTG NM_009424.2–1227s1c1
TRAF6 CCGGGCCTGCATCATCAAATCCATACTCGAGTATGGATTTGATGATGCAGGCTTTTTG NM_009424.2–680s1c1
TRIM50 CCGGCGGATTATTAATGAGTCCGATCTCGAGATCGGACTCATTAATAATCCGTTTTTG NM_178240.1–487s1c1
TRIM25 CCGGCCTGGAGTACAAACTGAGGAACTCGAGTTCCTCAGTTTGTACTCCAGGTTTTTG NM_009546.1–597s1c1
TRIM28 CCGGCCACCAGTCTTCAAGGTCTTTCTCGAGAAAGACCTTGAAGACTGGTGGTTTTTG NM_011588.1–2065s1c1
TRIM13 CCGGGCAGGTCAATTACTCCCTAAACTCGAGTTTAGGGAGTAATTGACCTGCTTTTTG NM_023233.1–331s1c1
CULLIN3 CCGGGTGCGAGAAGATGTACTAAATCTCGAGATTTAGTACATCTTCTCGCACTTTTTG NM_016716.4–384s21c1
TRIM30 CCGGGAGAACCAAATACAGATCAATCTCGAGATTGATCTGTATTTGGTTCTCTTTTTG NM_009099.2–742s21c1
TRIM21 CCGGTTGTCTCCTTCTACAACATAACTCGAGTTATGTTGTAGAAGGAGACAATTTTTG NM_009277.3–1421s21c1
TRIM21 CCGGTGACAATGAGGAGAGGTTTAGCTCGAGCTAAACCTCTCCTCATTGTCATTTTTG NM_009277.3–1131s21c1
TRIM21 CCGGGAACCTGGACACGTTAGATATCTCGAGATATCTAACGTGTCCAGGTTCTTTTTG NM_009277.3–945s21c1
STUB1 CCGGGAGAGTTATGATGAGGCCATTCTCGAGAATGGCCTCATCATAACTCTCTTTTT NM_019719.2–833s1c1