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. Author manuscript; available in PMC: 2016 Aug 1.
Published in final edited form as: J Data Mining Genomics Proteomics. 2013 Jul 31;4(3):135. doi: 10.4172/2153-0602.1000135

Table 1.

Sensitivity of mBLAST algorithms compared to BLASTa.

Aligner Queries with hits
(BLAST)		 Queries with hits
(mBLAST)		 Common queries (#) Common queries (%) Top blast within top n
mBLAST matches (%)b
mBLASTX 26,339 26,174 25,958 98.6 79.3
26,339 26,174 25,958 98.6 97.1
26,339 26,174 25,958 98.6 97.9
26,339 26,174 25,958 98.6 98
mTBLASTX 94,920 99,844 94,849 99.9 77.3
94,920 99,844 94,849 99.9 92.9
94,920 99,844 94,849 99.9 94.5
94,920 99,844 94,849 99.9 96
mBLASTP 35,713 35,739 35,451 99.3 90.8
35,713 35,739 35,451 99.3 95.2
35,713 35,739 35,451 99.3 95.7
35,713 35,739 35,451 99.3 96.3
a

For exact parameters used see Methods;

b

‘n’=1, 5, 10 or 32 mBLAST hits considered.