Table 1.

IS1341-type transposases (tnpB genes) analyzed in this work and their respective sense overlapping transcripts (sotRNAs)

Gene	IS200/605 family group	chromosome	tnpB start codon	tnpB stop codon	strand	sotRNA transcript start	sotRNA transcript end	sotRNA size [nt]	R1 strain equivalent genes
VNG0013C	IS1341	chr	12734	11478	reverse	11641	11428	214	OE1019R
VNG0026C	IS1341	chr	21789	20533	reverse	20701	20498	204	OE1040R
VNG0042G	IS1341	chr	35931	34651	reverse	34775	34570	206	OE1070R
VNG0044H	IS605 (VNG0043H – VNG0044H), convergent	chr	36715	37971	forward	37813	38042	230	OE1074F
VNG0286C	IS605 (VNG0285C – VNG0286C), convergent	chr	229443	230597	forward	230444	230629	186	OE1440F
VNG2652H	IS605 (VNG2653C – VNG2652H), divergent	chr	1989188	1987884	reverse	1988005	1987819	187	OE4727R
VNG6181H	IS605 (VNG6182H – VNG6181H), convergent	pNRC200	155603	154368	reverse	154508	154259	250	OE5062R
VNG6221H	IS605 (VNG6222H – VNG6221H), convergent	pNRC200	183054	181795	reverse	182008	181724	285	OE5102R
VNG6361G	IS1341	pNRC200	287504	288844	forward	288696	288915	220	OE6034F
VNG6406H	IS1341	pNRC200	316931	315786	reverse	315833	315631	203	OE6089R