Table 3.
Genome statistics
| Attribute | P12002L | P12002S | ||
|---|---|---|---|---|
| Value | % of Totala | Value | % of Totala | |
| Genome size (bp) | 48,689 | 100.00 | 49,847 | 100.00 |
| DNA coding (bp) | 43,666 | 89.68 | 44,538 | 89.35 |
| DNA G + C (bp) | 14,088 | 28.93 | 14,422 | 28.93 |
| DNA scaffolds | 1 | 100.00 | 1 | 100.00 |
| Total genes | 82 | 100.00 | 86 | 100.00 |
| Protein coding genes | 82 | 100.00 | 86 | 100.00 |
| RNA genes | 0 | 0.00 | 0 | 0.00 |
| Pseudo genes | 0 | 0.00 | 0 | 0.00 |
| Genes in internal clusters | 0 | 0.00 | 0 | 0.00 |
| Genes with function prediction | 16 | 19.51 | 14 | 16.28 |
| Genes assigned to COGs | 9 | 10.98 | 9 | 10.47 |
| Genes with Pfam domains | 18 | 21.95 | 15 | 17.44 |
| Genes with signal peptides | 1 | 1.22 | 0 | 0.00 |
| Genes with transmembrane helices | 4 | 4.89 | 8 | 9.30 |
| CRISPR repeats | 0 | 0.00 | 0 | 0.00 |
aThe total is based on the size of the genome in base pairs or the total number of protein-coding genes in the annotated genome