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. 2015 Apr 11;12(6):628–642. doi: 10.1080/15476286.2015.1038012

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© 2015 The Author(s). Published with license by Taylor & Francis Group, LLC

© Christopher R Cabanski, Nicole M White, Ha X Dang, Jessica M Silva-Fisher, Corinne E Rauck, Danielle Cicka, and Christopher A Maher

This is an Open Access article distributed under the terms of the Creative Commons Attribution-Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted.

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Figure 3. — Recurrently altered lncRNAs across 8 cancer types. (A) Heatmap showing well-characterized lncRNAs and onco-lncRNAs that are altered in 4 or more cancer types (red = upregulated, orange = up-regulated and outlier, blue = downregulated, magenta = down-regulated and outlier, gray = outlier). The top panel shows previously characterized lncRNAs and which TCGA cohorts they are altered in. The bottom panel highlights onco-lncRNAs altered in 4 or more cancer types. Boxplots showing expression levels (FPKM) of (B) onco-lncRNA-1 and (C) onco-lncRNA-21 for normal samples (N), tumor samples with a matched normal (T), and unpaired tumor samples (UT) across all 8 cancer types. Red boxes highlight upregulated cancer types and blue boxes highlight downregulated cancer types.