Table 5.
QTL with significantly different effects between diets
| QTL | Trait | Chr | Var LE (%) | Var HE (%) | Z Diet |
|---|---|---|---|---|---|
| SNP5 | EPR | 0 | 5.06 | 1.16 | 4.41*** |
| QTL7 | EPR | 2 | 5.44 | 2.61 | 2.75* |
| QTL23 | EPR | 4 | 4.8 | 0.54 | 9.27*** |
| QTL47 | EPR | 9 | 4.92 | 0.53 | 7.14*** |
| QTL68 | EPR | 11 | 0.02 | 4.41 | 7.78*** |
| QTL79 | EPR | 17 | 2.39 | 0.83 | 14.23*** |
| QTL90 | EPR | 20 | 4.89 | 0.01 | 8.48*** |
| QTL7 | EPR1 | 2 | 3.86 | 1.79 | 22.38*** |
| QTL14 | EPR1 | 3 | 5.98 | 2.1 | 20.68*** |
| QTL28 | EPR1 | 5 | 3.48 | 1.01 | 11.56*** |
| QTL38 | EPR1 | 7 | 2.64 | 1.12 | 18.8*** |
| QTL39 | EPR1 | 7 | 3.19 | 2.27 | 13.72*** |
| QTL40 | EPR1 | 7 | 3.01 | 1.37 | 13.76*** |
| QTL42 | EPR1 | 8 | 4.15 | 6.22 | 14.25*** |
| QTL44 | EPR1 | 9 | 1.42 | 3.57 | 3.74*** |
| QTL46 | EPR1 | 9 | 0.01 | 4.18 | 7.8*** |
| QTL47 | EPR1 | 9 | 5.52 | 0.46 | 7.28*** |
| QTL51 | EPR1 | 9 | 4.26 | 2.66 | 22.76*** |
| QTL71 | EPR1 | 12 | 0.02 | 4.26 | 7.04*** |
| QTL75 | EPR1 | 13 | 3.27 | 2.21 | 19.83*** |
| QTL79 | EPR1 | 17 | 5.85 | 1.68 | 21.41*** |
| QTL90 | EPR1 | 20 | 7.09 | 0.21 | 11.12*** |
| QTL91 | EPR1 | 21 | 4.2 | 1.05 | 12.59*** |
| QTL99 | EPR1 | 23 | 3.92 | 0.24 | 8.92*** |
| QTL110 | EPR1 | 27 | 3.48 | 1.19 | 14.93*** |
| QTL116 | EPR1 | 28 | 9.68 | 0 | 13.09*** |
| QTL7 | EPR2 | 2 | 4.9 | 1.84 | 3.66*** |
| QTL67 | EPR2 | 11 | 5.07 | 0.89 | 4.55*** |
| QTL87 | EPR2 | 20 | 4.46 | 0.68 | 6.46*** |
| SNP4 | EPR3 | 0 | 6.04 | 0.95 | 5.77*** |
| SNP5 | EPR3 | 0 | 6.87 | 0.9 | 6.39*** |
| QTL7 | EPR3 | 2 | 5.65 | 0.94 | 5.42*** |
| QTL26 | EPR3 | 4 | 3.19 | 0.07 | 15.03*** |
| QTL51 | EPR3 | 9 | 4.57 | 0.78 | 18.88*** |
| QTL75 | EPR3 | 13 | 3.6 | 1.3 | 18.47*** |
| QTL90 | EPR3 | 20 | 4.12 | 0.03 | 8.24*** |
| QTL1 | ESshape | 1 | 1.88 | 5.4 | 3.58*** |
| QTL45 | ESshape | 9 | 1.58 | 4.7 | 3.44*** |
| QTL84 | ESshape | 19 | 1.29 | 4.11 | 5.9*** |
| QTL59 | EW | 10 | 2.37 | 4.98 | 2.74* |
| QTL15 | ESC | 3 | 4.97 | 1.7 | 3.16** |
| QTL74 | ESC | 13 | 2.13 | 4.55 | 2.96** |
| QTL83 | ESC | 19 | 4.05 | 1.41 | 3.13** |
| QTL69 | RSS | 12 | 5.62 | 2.46 | 3.82*** |
| QTL83 | RSS | 19 | 3.95 | 1.09 | 3.37** |
| QTL117 | RSS | LGE22 | 0.47 | 2.41 | 4.97*** |
| QTL13 | YSS | 3 | 4.88 | 2.12 | 2.87* |
| QTL15 | YSS | 3 | 5.84 | 1.61 | 3.98*** |
| QTL16 | YSS | 3 | 4.96 | 1.72 | 3.45*** |
| QTL52 | YSS | 9 | 4.34 | 0.64 | 4.43*** |
| QTL56 | YSS | 10 | 4.33 | 0.9 | 7.3*** |
| QTL82 | YSS | 19 | 4.26 | 0.26 | 5.93*** |
| QTL11 | ESS | 2 | 1.81 | 5.71 | 3.84*** |
| QTL102 | ESS | 24 | 4.89 | 1.3 | 3.01** |
| QTL117 | ESS | LGE22 | 0.06 | 4.46 | 6.14*** |
| QTL4 | ESSTIF | 1 | 7.56 | 2.94 | 3.45*** |
| QTL85 | ESSTIF | 20 | 3.02 | 1.19 | 4.38*** |
| QTL46 | HU | 9 | 1.22 | 5.17 | 3.95*** |
| QTL110 | HU | 27 | 1.73 | 4.49 | 3.55*** |
| QTL19 | EMTSP | 3 | 2.75 | 4.92 | 2.77* |
| QTL87 | EMTSP | 20 | 1.24 | 3.37 | 4.04*** |
| QTL100 | EMTSP | 24 | 1.46 | 3.91 | 2.84* |
| QTL62 | YOLKIND | 10 | 5.14 | 0.89 | 3.03** |
| QTL105 | YOLKIND | 26 | 4.19 | 0.64 | 3.55*** |
Chr chromosome that carries the QTL, var LE variance explained for the low energy diet, var HE variance explained for the high energy diet, LGE22 linkage group LGE22C19W28_E50C23, Z Diet Z test statistics for QTL × diet interaction
* P < 0.1, ** P < 0.05, *** P < 0.01