Table 1.
Analysis of transcriptome by RNA-seq.
| A. Tissue sampled | B. Transcriptome | |
|---|---|---|
| Blood | Total raw read (100bp paired end) | 5.1×1010 |
| Bone Marrow | Total number of validated | 49,176 |
| Brain | Transcripts | |
| Kidney | Total number of unique transcripts | 42,707 |
| Liver | Total number of unique genes | 34,191 |
| Cervical lymph node | ||
| Lung | ||
| Muscle | ||
| Spleen | ||
| Thymus | ||
A. Each tissue was sampled from two hamsters; one treated with LPS and the second was untreated. B. Pooled RNA from both hamsters was sequenced on Illumina HiSeq platform. Summary statistics for raw reads, number of validated transcripts, unique transcript (eliminating transcripts with alternative start site or 5′ end) and total number of genes (based on BLASTP to rat genome).