Table 3.
Single colony 1 | Single colony 2 | Single colony 3 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Totala | Fixedb | Heteroc | Totala | Fixedb | Heteroc | Totala | Fixedb | Heteroc | Total variation | |
R160 | 5 | 2 | 3 | 4 | 3 | 1 | - | - | - | 9 |
R376 | 3 | 1 | 2 | 8 | 2 | 6 | 6 | 1 | 5 | 17 |
R458 | 3 | 3 | 0 | 5 | 2 | 3 | 3 | 0 | 3 | 11 |
R486 | 0 | 0 | 0 | 2 | 0 | 2 | - | - | - | 2 |
R631 | 5 | 0 | 5 | 6 | 0 | 6 | 8 | 0 | 8 | 19 |
R637 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R641 | 9 | 9 | 0 | 3 | 0 | 3 | 6 | 0 | 6 | 18 |
R721 | 0 | 0 | 0 | 4 | 0 | 4 | 0 | 0 | 0 | 4 |
R912 | 4 | 4 | 0 | 6 | 3 | 3 | 7 | 7 | 0 | 17 |
R965 | 4 | 4 | 0 | 1 | 1 | 0 | - | - | - | 5 |
R966 | 5 | 0 | 5 | 1 | 0 | 1 | 6 | 0 | 6 | 12 |
R1035 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1415 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
aTotal number variants unique between the corresponding single colonies
bFixed variants as defined as having a read frequency of ≥ 70 %
cHeterogeneous variants as defined as having a read frequency < 70 % and ≥ 30 %
-A third single colony was not available for the comparison