Table 2. List of genes recovered by different types of univariate ETM, containing all flowering genes assigned to any of the 2000 SNPs with the lowest p-value for each method.
Numbers indicate the rank for each gene (1 being the gene with lowest associated p-value). dl: univariate analysis using summer day length. lt: univariate analysis using latitude.
| gene | name | LM | EN | RF | CC | dl | lt |
|---|---|---|---|---|---|---|---|
| AT4G11280 | ACS6 | 618 | - | - | - | 469 | 575 |
| AT2G45660 | AGL20 | - | - | - | - | 1340 | 1224 |
| AT4G36920 | AP2 | - | - | - | 832 | - | - |
| AT5G24470 | APRR5 | 1088 | 659 | - | - | - | - |
| AT3G10185 | AT3G10185 | - | - | - | - | 466 | 443 |
| AT1G18450 | ATARP4 | 1276 | - | - | 213 | - | - |
| AT3G51780 | AtBAG4 | - | - | - | 1172 | - | - |
| AT1G50960 | ATGA2OX7 | - | - | - | - | 1420 | - |
| AT3G63010 | ATGID1B | - | - | - | 647 | - | - |
| AT4G32980 | ATH1 | - | - | 986 | - | - | - |
| AT5G03790 | ATHB51 | - | - | - | - | 1356 | 1406 |
| AT3G03090 | AtVGT1 | - | - | 690 | 568 | 1350 | - |
| AT2G31650 | ATX1 | 997 | 1146 | 890 | - | - | - |
| AT2G33540 | CPL3 | - | 946 | - | - | 949 | - |
| AT4G20910 | CRM2 | - | 1436 | - | - | 688 | 808 |
| AT4G00450 | CRP | 5 | 1120 | 85 | 11 | - | - |
| AT5G03730 | CTR1 | - | - | - | 890 | - | - |
| AT1G12610 | DDF1 | - | - | - | - | - | 832 |
| AT1G63030 | DDF2 | - | - | 319 | - | - | - |
| AT4G03400 | DFL2 | - | - | - | 349 | - | - |
| AT5G45830 | DOG1 | 1 | 23 | 31 | 87 | 21 | 36 |
| AT5G62640 | ELF5 | - | - | 689 | - | 888 | 1201 |
| AT4G03430 | EMB2770 | - | - | - | 1166 | - | - |
| AT5G11530 | EMF1 | 479 | - | - | - | - | - |
| AT1G04400 | FHA | - | - | - | - | - | 456 |
| AT5G10140 | FLC | - | 839 | 617 | 963 | 627 | - |
| AT3G10390 | FLD | - | - | - | - | 429 | 292 |
| AT4G00650 | FRI | 181 | 14 | 332 | 5 | 493 | 1087 |
| AT5G63980 | FRY1 | - | - | - | - | 878 | 840 |
| AT1G03160 | FZL | - | - | - | 914 | - | - |
| AT4G02780 | GA1 | - | - | 1367 | - | - | - |
| AT1G80340 | GA4H | - | - | - | - | 1090 | 669 |
| AT1G22770 | GI | - | - | 583 | - | - | - |
| AT2G39810 | HOS1 | - | - | - | 818 | - | - |
| AT1G09700 | HYL1 | - | 856 | - | - | - | - |
| AT5G67100 | ICU2 | - | 163 | - | - | 1270 | - |
| AT3G18165 | MOS4 | - | - | - | - | 461 | 193 |
| AT4G24020 | NLP7 | - | 915 | - | - | - | - |
| AT5G48150 | PAT1 | 490 | - | - | - | 1354 | 1407 |
| AT3G28860 | PGP19 | 1337 | - | - | - | - | - |
| AT2G18790 | PHYB | 1039 | 765 | 924 | - | - | - |
| AT4G16250 | PHYD | - | - | 633 | - | 537 | 568 |
| AT3G12810 | PIE1 | 320 | 225 | 98 | - | - | - |
| AT3G62090 | PIL2 | - | 904 | 238 | - | - | - |
| AT2G01570 | RGA1 | - | - | - | 127 | - | - |
| AT2G47310 | simtoFCA | - | - | - | 199 | - | - |
| AT5G46910 | simtoREF6 | - | 1113 | - | - | - | - |
| AT4G33280 | simtoVRN1 | - | - | 1310 | - | - | - |
| AT4G11110 | SPA2 | 34 | 239 | 534 | 745 | 91 | 94 |
| AT3G28730 | SSRP1 | - | - | - | 608 | - | - |
| AT4G02700 | SULTR3;2 | - | - | - | 1137 | 1254 | - |
| AT1G23090 | SULTR3;3 | - | 412 | - | - | 1345 | - |
| AT2G22540 | SVP | 36 | 6 | 2 | 241 | 39 | 53 |
| AT3G22380 | TIC | - | 1427 | 1123 | - | - | - |
| AT1G17110 | UBP15 | - | - | 800 | - | - | - |
| AT4G16845 | VRN2 | 1179 | - | - | - | 717 | 751 |
| AT5G57360 | ZTL | - | - | 1242 | 1125 | - | - |