Table 1. Diversity of ITS, BT2 and concatenated ITS-BT2 datasets in Cladophialophora carrionii and Fonsecaea spp.
Strains (N) | Polymorphic site (S) | Haplotype diversity (H d) | Nucleotide diversity (π) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Singletons | Parsimonious informative | |||||||||||
ITS | BT2 | ITS-BT2 | ITS | BT2 | ITS-BT2 | ITS (n) | BT2 (n) | ITS-BT2 (n) | ITS | BT2 | ITS-BT2 | |
C. carrionii (67) | 11 | 13 | 24 | 3 | 16 | 19 | 0.4969 (10) | 0.7437 (20) | 0.8480 (35) | 0.00675 | 0.00877 | 0.00621 |
1 | 7 | 8 | 20 | 20 | 40 | 0.7989 (11) | 0.7732 (13) | 0.8718 (18) | 0.01386 | 0.01823 | 0.01595 |
(N) = strains number, (n) = number of haplotypes