TABLE 2.
Potential virulence genes of Weissella species as revealed by in silico screening of the annotated genome sequences.
| Strains | Virulence factors detected by analysis in silico of genome sequences (locus_tag) | ||||
|---|---|---|---|---|---|
| Aggregation substance | Collagen adhesion | Hemolysin | Mucus-binding proteins | Staphylococcal surface protein | |
| W. ceti WS08 | – | 2 CA (WS08_0071, WS08_0583) | 1 Hly (WS08_0556), 1 HlyA (WS08_0902) | – | 5SPA (WS08_0360, WS08_0450, WS08_0978, WS08_1156, WS08_1190) |
| W. ceti WS74 | – | 3 CA (WS74 0069, WS74 0070, WS74_0584) | 1 Hly (WS74_0557), 1 HlyA (WS74_0968) | – | 4 SPA (WS74_0360, WS74_0451, WS74_1225, WS74_1261) |
| W. ceti WS105 | – | 3 CA (WS105 0070, WS105 0071, WS105_0581) | 1 Hly (WS105_0554), 1 HlyA (WS105_0965), 1 Hly-like protein (WS105_0227) | – | 4 SPA (WS105_0358, WS105_0448, WS105_1219, WS105_1255) |
| W. ceti NC36 | – | 5 CA (WCNC 00912, WCNC 00917, WCNC 00922, WCNC 05547, WCNC 06207) 1 PA-ADHE | – | 1 MBP (WCNC_01840) | – |
| W. cibaria KACC 11862 | – | – | 2 Hly (ESE_RS0108795, ESE_RS11605) | – | – |
| W. confusa LBAE C39-2 | – | 1 (WEISSC39_RS00260) | 2 Hly (WEISSC39_RS08935, WEISSC39_RS08940) | 1 MBP (WEISSC39_RS05980) | – |
| W. halotolerans DSM 20190 | – | – | 2 Hly (G414_RS0106810, G414_RS0106815) | – | – |
| W. hellenica Wikim14 | – | – | 2 Hly (TY24_RS08990, TY24_RS08995) | – | – |
| W. koreensis KACC 15510 | – | – | – | – | – |
| W. koreensis KCTC 3621 | – | – | 2 Hly (JC2156_RS08435, JC2156_10680) | – | – |
| W. oryzae SG25 | 2 AGS (WOSG25_200030, WOSG25_200040) 2 Asa1/PrgB (WOSG25_200030, WOSG25_200040) | – | 3 hemolysins (WOSG25 150280, WOSG25_RS09625, WOSG25_RS09635) | – | – |
| W. paramesenteroides ATCC 33313 | – | – | 2 Hly (HMPREF0877_RS09665, HMPREF0877_RS09670) | – | – |
| W. thailandensis fsh4-2 | – | – | 2 Hly (WT2_01519, WT2_01520) | – | |