TABLE 1.
Cph2-bound genes from ChIP-seqa
| No. | Systematic name | Gene name | Bound by: |
Upregulated in gut | Description | |||
|---|---|---|---|---|---|---|---|---|
| Rtg1/3 | Hms1 | Tye7 | Zcf21 | |||||
| 1 | orf19.921 | HMS1 | Y | Y | Y | Y | Transcriptional regulator required for morphogenesis | |
| 2 | orf19.1048 | IFD6 | Y | Y | Aldo-keto reductase family member | |||
| 3 | orf19.6116 | GLK4 | Y | Y | Y | Putative glucokinase | ||
| 4 | orf19.734 | GLK1 | Y | Y | Y | Putative glucokinase | ||
| 5 | orf19.1785 | UNK | Y | Y | Hap43p-repressed gene | |||
| 6 | orf19.7084 | DFI1 | Y | Y | Y | Cell surface-associated glycoprotein | ||
| 7 | orf19.4961 | STP2 | Y | Y | Y | Amino acid-regulated transcription factor | ||
| 8 | orf19.5079 | CDR4 | Y | Y | Y | Y | Putative transporter of ATP binding cassette superfamily | |
| 9 | orf19.542 | HXK2 | Y | Y | Hexokinase II | |||
| 10 | orf19.1826 | MDM34 | Y | Y | Y | Putative transcription factor with zinc finger DNA binding motif | ||
| 11 | orf19.7021 | GPH1 | Y | Y | Y | Putative glycogen phosphorylase with a role in glycogen metabolism | ||
| 12 | orf19.4450.1 | UNK | Y | Y | Protein conserved among the fungal CTG clade | |||
| 13 | orf19.882 | HSP78 | Y | Y | Putative heat shock protein | |||
| 14 | orf19.2943.5 | UNK | Y | Y | ORF, dubious | |||
| 15 | orf19.2529.1 | UNK | Y | Spider biofilm repressed | ||||
| 16 | orf19.6659 | GAP6 | Y | Y | Y | Broad-specificity amino acid permease | ||
| 17 | orf19.4679 | AGP2 | Y | Amino acid permease | ||||
| 18 | orf19.5626 | UNK | Y | Y | Y | Biofilm-induced gene | ||
| 19 | orf19.460 | CEK2 | Y | Mitogen-activated protein kinase required for wild-type efficiency of mating | ||||
| 20 | orf19.347 | RSN1 | Y | Y | Hap43p-repressed gene | |||
| 21 | orf19.2929 | GSC1 | Y | Subunit of beta-1,3-glucan synthase | ||||
| 22 | orf19.727 | UNK | Y | Predicted ORF overlapping major repeat sequence on chromosome R | ||||
| 23 | orf19.6734 | TCC1 | Y | Protein involved in regulation of filamentous growth and virulence | ||||
| 24 | orf19.4476 | UNK | Protein with NADP-dependent oxidoreductase domain, biofilm-induced gene | |||||
| 25 | orf19.5191 | FGR6-1 | Y | Protein lacking an ortholog in S. cerevisiae | ||||
| 26 | orf19.3682 | CWH8 | Putative dolichyl pyrophosphate phosphatase | |||||
| 27 | orf19.6874 | UNK | Putative helix-loop-helix transcription factor with a role in filamentous growth | |||||
| 28 | orf19.7436 | AAF1 | Y | Possible regulatory protein | ||||
| 29 | orf19.3549 | CDC21 | Putative thymidylate synthase | |||||
| 30 | orf19.3231 | CDC27 | Putative ubiquitin-protein ligase | |||||
| 31 | orf19.5005 | OSM2 | Putative mitochondrial fumarate reductase | |||||
| 32 | orf19.2809 | CTN3 | Predicted peroxisomal carnitine acetyltransferase | |||||
| 33 | orf19.5604 | MDR1 | Y | Plasma membrane multidrug efflux pump | ||||
| 34 | orf19.1659 | ALG8 | Putative glucosyltransferase involved in cell wall mannan biosynthesis | |||||
| 35 | orf19.88 | ILV5 | Ketol-acid reductoisomerase | |||||
| 36 | orf19.5762 | PGA61 | Putative glycosylphosphatidylinositol-anchored protein | |||||
| 37 | orf19.33 | LPF1 | Similar to orf19.7550 | |||||
| 38 | orf19.4669 | AAT22 | Protein similar to S. cerevisiae Aat2p | |||||
| 39 | orf19.434 | PRD1 | Putative proteinase | |||||
| 40 | orf19.251 | GLX3 | Glutathione-independent glyoxylase, Spider biofilm induced | |||||
| 41 | orf19.5952 | UNK | Sef1p-, Sfu1p-, and Hap43p-induced protein of unknown function | |||||
| 42 | orf19.6869 | BZD98 | Putative lipid raft-associated protein, Spider biofilm induced | |||||
| 43 | orf19.1313 | CDR3 | Y | Transporter of the Pdrp/Cdrp family of the ATP binding cassette superfamily | ||||
| 44 | orf19.3981 | MAL31 | Y | Putative high-affinity maltose transporter | ||||
| 45 | orf19.6738 | VAN1 | Member of Mnn9p family of mannosyltransferases | |||||
| 46 | orf19.4702 | UNK | Biofilm-induced gene | |||||
| 47 | orf19.4081 | UNK | Dubious ORF | |||||
| 48 | orf19.3490 | FGR6-4 | Y | Protein lacking an ortholog in S. cerevisiae | ||||
| 49 | orf19.6986 | MSB3 | Has domain(s) with predicted Rab GTPase activator activity | |||||
| 50 | orf19.2468 | TMT1 | Ortholog(s) has trans-aconitate 3-methyltransferase activity | |||||
| 51 | orf19.2825 | UNK | Putative cytosolic Fe-S protein assembly protein | |||||
| 52 | orf19.3405 | ZCF18 | Putative transcription factor with zinc finger DNA binding motif | |||||
| 53 | orf19.1690 | TOS1 | Protein similar to alpha agglutinin anchor subunit | |||||
| 54 | orf19.837 | GNA1 | Glucosamine-6-phosphate acetyltransferase | |||||
| 55 | orf19.515 | UNK | Has domain(s) with predicted nucleic acid binding, zinc ion binding activity | |||||
| 56 | orf19.396 | EAF6 | Y | Subunit of the NuA4 histone acetyltransferase complex | ||||
| 57 | orf19.4064 | GPI7 | Protein involved in attachment of glycosylphosphatidylinositol-linked proteins to cell wall | |||||
a
The list only includes the peaks found in the upstream regions of genes (83% of the total peaks found). Y, yes.